BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2143
(434 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025128-1|ABE73299.1| 416|Drosophila melanogaster IP08460p pro... 29 2.1
BT023562-1|AAY84962.1| 208|Drosophila melanogaster IP09703p pro... 29 2.1
BT023547-1|AAY84947.1| 209|Drosophila melanogaster IP09803p pro... 29 2.1
AE014296-954|AAF50779.1| 288|Drosophila melanogaster CG15214-PA... 29 2.1
AY119110-1|AAM50970.1| 441|Drosophila melanogaster RE12054p pro... 29 2.7
AE013599-233|AAM70833.1| 449|Drosophila melanogaster CG3287-PC,... 29 2.7
AE013599-232|AAG22207.2| 449|Drosophila melanogaster CG3287-PB,... 29 2.7
BT016002-1|AAV36887.1| 686|Drosophila melanogaster RE40670p pro... 28 4.8
AE014134-1834|AAF52910.2| 686|Drosophila melanogaster CG5381-PA... 28 4.8
BT003472-1|AAO39475.1| 917|Drosophila melanogaster RE68558p pro... 28 6.3
AE014135-43|AAF59360.3| 917|Drosophila melanogaster CG31999-PA ... 28 6.3
AE014296-1015|AAN12116.1| 104|Drosophila melanogaster CG32416-P... 27 8.3
>BT025128-1|ABE73299.1| 416|Drosophila melanogaster IP08460p
protein.
Length = 416
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 263 TTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQND 388
+TPS TH ++ S NN+ P D T+S A++ND
Sbjct: 287 STPSKQVTHTTVESRENNIIPSSRNDTTKSLQTDVGYAMKND 328
>BT023562-1|AAY84962.1| 208|Drosophila melanogaster IP09703p
protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 263 TTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQND 388
+TPS TH ++ S NN+ P D T+S A++ND
Sbjct: 79 STPSKQVTHTTVESRENNIIPSSRNDTTKSLQTDVGYAMKND 120
>BT023547-1|AAY84947.1| 209|Drosophila melanogaster IP09803p
protein.
Length = 209
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 263 TTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQND 388
+TPS TH ++ S NN+ P D T+S A++ND
Sbjct: 80 STPSKQVTHTTVESRENNIIPSSRNDTTKSLQTDVGYAMKND 121
>AE014296-954|AAF50779.1| 288|Drosophila melanogaster CG15214-PA
protein.
Length = 288
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 263 TTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQND 388
+TPS TH ++ S NN+ P D T+S A++ND
Sbjct: 159 STPSKQVTHTTVESRENNIIPSSRNDTTKSLQTDVGYAMKND 200
>AY119110-1|AAM50970.1| 441|Drosophila melanogaster RE12054p
protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 233 ELRDAYSKCSTTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLPNQE 412
E RDA + TP + T++ L + LAPG P S K + ND + Q+
Sbjct: 155 EYRDAGEYWNKTPKTDYTYSELSPHRRQLAPGIVAMPNMSR-KSLEN--HNDRVNYMVQQ 211
Query: 413 TPQSQK 430
P ++
Sbjct: 212 NPAQEE 217
>AE013599-233|AAM70833.1| 449|Drosophila melanogaster CG3287-PC,
isoform C protein.
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 233 ELRDAYSKCSTTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLPNQE 412
E RDA + TP + T++ L + LAPG P S K + ND + Q+
Sbjct: 155 EYRDAGEYWNKTPKTDYTYSELSPHRRQLAPGIVAMPNMSR-KSLEN--HNDRVNYMVQQ 211
Query: 413 TPQSQK 430
P ++
Sbjct: 212 NPAQEE 217
>AE013599-232|AAG22207.2| 449|Drosophila melanogaster CG3287-PB,
isoform B protein.
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 233 ELRDAYSKCSTTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLPNQE 412
E RDA + TP + T++ L + LAPG P S K + ND + Q+
Sbjct: 155 EYRDAGEYWNKTPKTDYTYSELSPHRRQLAPGIVAMPNMSR-KSLEN--HNDRVNYMVQQ 211
Query: 413 TPQSQK 430
P ++
Sbjct: 212 NPAQEE 217
>BT016002-1|AAV36887.1| 686|Drosophila melanogaster RE40670p
protein.
Length = 686
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 224 ITNELRDAYSKCSTTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLP 403
I NE +K TPS + + P+ LNN+ + + T +NI +D N+LP
Sbjct: 580 ILNESAAKGTKVYLTPSYAENKYNYPNELNNVNNRSSKEVTSANI----SVSTSDTNELP 635
Query: 404 NQ 409
Q
Sbjct: 636 GQ 637
>AE014134-1834|AAF52910.2| 686|Drosophila melanogaster CG5381-PA
protein.
Length = 686
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 224 ITNELRDAYSKCSTTPSMNQTHNSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLP 403
I NE +K TPS + + P+ LNN+ + + T +NI +D N+LP
Sbjct: 580 ILNESAAKGTKVYLTPSYAENKYNYPNELNNVNNRSSKEVTSANI----SVSTSDTNELP 635
Query: 404 NQ 409
Q
Sbjct: 636 GQ 637
>BT003472-1|AAO39475.1| 917|Drosophila melanogaster RE68558p
protein.
Length = 917
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 290 NSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLPNQ 409
N++ SY N PGF +D T + + N+ N LP Q
Sbjct: 350 NTVGSYSCNCLPGFNLDATLNKCVDINECSINNHNCLPTQ 389
>AE014135-43|AAF59360.3| 917|Drosophila melanogaster CG31999-PA
protein.
Length = 917
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 290 NSLPSYLNNLAPGFAMDPTQSNIKHTDGAIQNDENDLPNQ 409
N++ SY N PGF +D T + + N+ N LP Q
Sbjct: 350 NTVGSYSCNCLPGFNLDATLNKCVDINECSINNHNCLPTQ 389
>AE014296-1015|AAN12116.1| 104|Drosophila melanogaster CG32416-PA
protein.
Length = 104
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 260 STTPSMNQTHNSLPSYLNNLAPGFA---MDPTQSNIKHTDGAIQNDENDLP-NQETPQSQ 427
+TT + +S LN + G A +D T SN D +QN+EN Q+T Q Q
Sbjct: 15 ATTAAATSPASSNMRLLNATSAGVAATFIDNTSSNASRNDHMVQNNENPASFEQQTLQLQ 74
Query: 428 K 430
+
Sbjct: 75 Q 75
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,162,191
Number of Sequences: 53049
Number of extensions: 317846
Number of successful extensions: 793
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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