Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2143
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.0  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   3.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   6.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   6.0  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 55  SPYPNWTRSK 84
           +PYPNW ++K
Sbjct: 110 TPYPNWAQNK 119


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 405 LGKSFSSFCIAPSVCLMLDWVG 340
           L ++F   CI P+V  +L W+G
Sbjct: 30  LVRAFCRNCIHPTVFSVLFWLG 51


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 405 LGKSFSSFCIAPSVCLMLDWVG 340
           L ++F   CI P+V  +L W+G
Sbjct: 478 LVRAFCRNCIHPTVFSVLFWLG 499


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 58  PYPNWTRSK 84
           PYPNW+ +K
Sbjct: 107 PYPNWSWAK 115


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 55  SPYPNWTRSK 84
           +PYP+WT +K
Sbjct: 103 APYPDWTWAK 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,245
Number of Sequences: 438
Number of extensions: 1858
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)