Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2141
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181640-1|AAD55426.1|  852|Drosophila melanogaster BcDNA.GH0981...    27   7.7  
AE014134-398|AAN10427.1|  852|Drosophila melanogaster CG4272-PB,...    27   7.7  
AE014134-397|AAF51264.2|  852|Drosophila melanogaster CG4272-PA,...    27   7.7  

>AF181640-1|AAD55426.1|  852|Drosophila melanogaster BcDNA.GH09817
           protein.
          Length = 852

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 192 SP*DKYKRSINKECFKIRFFFLFESFRCVPCGNG 293
           +P  + KRSIN +  K+ +F   + F CVP   G
Sbjct: 295 APQKRTKRSINFDEVKVFYFPRQQGFSCVPTAGG 328


>AE014134-398|AAN10427.1|  852|Drosophila melanogaster CG4272-PB,
           isoform B protein.
          Length = 852

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 192 SP*DKYKRSINKECFKIRFFFLFESFRCVPCGNG 293
           +P  + KRSIN +  K+ +F   + F CVP   G
Sbjct: 295 APQKRTKRSINFDEVKVFYFPRQQGFSCVPTAGG 328


>AE014134-397|AAF51264.2|  852|Drosophila melanogaster CG4272-PA,
           isoform A protein.
          Length = 852

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 192 SP*DKYKRSINKECFKIRFFFLFESFRCVPCGNG 293
           +P  + KRSIN +  K+ +F   + F CVP   G
Sbjct: 295 APQKRTKRSINFDEVKVFYFPRQQGFSCVPTAGG 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,005
Number of Sequences: 53049
Number of extensions: 247208
Number of successful extensions: 368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)