Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2139
(321 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 120 2e-28
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 120 2e-28
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 119 6e-28
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 110 3e-25
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 48 2e-06
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 48 2e-06
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 48 2e-06
03_01_0034 + 318432-318825,318902-319851 48 2e-06
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 48 2e-06
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 48 2e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 48 2e-06
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 48 2e-06
02_03_0061 + 14582724-14582840,14583360-14584334 31 0.15
08_02_0117 + 12767502-12767588,12768846-12768908,12769299-12770741 29 0.62
03_05_0384 - 23671097-23671201,23671343-23671429,23671542-236716... 29 0.81
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 1.1
07_03_0046 + 12781335-12782073,12782254-12783014 28 1.4
06_03_0272 + 19053455-19053587,19054665-19056627,19056827-190568... 28 1.9
04_01_0502 - 6587068-6587964 28 1.9
01_05_0648 + 23915469-23915898,23916551-23916619,23916956-239173... 28 1.9
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 27 2.5
09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616 27 3.3
06_01_0508 - 3674787-3675140,3675257-3675566,3675672-3675806,367... 27 3.3
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 27 3.3
12_01_0113 - 864380-865027,865419-866408,867128-867194,868377-86... 26 5.7
04_03_0278 - 13761999-13762462,13762628-13762727,13763065-137632... 26 5.7
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 26 5.7
02_05_0316 - 27825871-27826509 26 5.7
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 26 7.6
07_03_0387 - 17536026-17536636,17536772-17537150 26 7.6
04_01_0312 + 4206400-4206627,4206661-4207269,4207425-4207902,420... 26 7.6
01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 26 7.6
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 120 bits (290), Expect = 2e-28
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA AYHEQLS + ITN+ F P++ + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVATIKT 337
Score = 25.8 bits (54), Expect = 7.6
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYPLPTGHIRTNHLCP*CLP*TAFLLLYHKHM 192
+++TASL FD LNVD+ L PYP R + + P + YH+ +
Sbjct: 236 SSLTASLRFDGALNVDVNEFQT---NLVPYP------RIHFMLSSYAPVISAEKAYHEQL 286
Query: 193 LLSHQPNSEMLPPS 234
++ NS P S
Sbjct: 287 SVAEITNSAFEPSS 300
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 120 bits (290), Expect = 2e-28
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA AYHEQLS + ITN+ F P++ + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVATIKT 337
Score = 25.8 bits (54), Expect = 7.6
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYPLPTGHIRTNHLCP*CLP*TAFLLLYHKHM 192
+++TASL FD LNVD+ L PYP R + + P + YH+ +
Sbjct: 236 SSLTASLRFDGALNVDVNEFQT---NLVPYP------RIHFMLSSYAPVISAEKAYHEQL 286
Query: 193 LLSHQPNSEMLPPS 234
++ NS P S
Sbjct: 287 SVAEITNSAFEPSS 300
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 119 bits (286), Expect = 6e-28
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA AYHEQLS ITN F P++ + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVATIKT 337
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 110 bits (264), Expect = 3e-25
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAPIIS A+HEQ S ITN+ F P + + KC P H KYM
Sbjct: 335 EFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYM 394
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ +IKT
Sbjct: 395 ACCLMYRGDVVPKDVNAAVHSIKT 418
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 436 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 495
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 496 MFRGKMSTKEVDEQMINVQ 514
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 277 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 336
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 337 MFRGKMSTKEVDEQMINVQ 355
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMINVQ 334
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 47.6 bits (108), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 272 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 331
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 332 MFRGRMSTKEVDEQMINVQ 350
>02_03_0061 + 14582724-14582840,14583360-14584334
Length = 363
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 116 VTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVK 220
+ Y+P I A N E L+F+Y++N PTN+ K
Sbjct: 177 ILYSPTIGA-NLVSESLAFTYLSNKAVTPTNKFFK 210
>08_02_0117 + 12767502-12767588,12768846-12768908,12769299-12770741
Length = 530
Score = 29.5 bits (63), Expect = 0.62
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 116 VTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVK 220
+ Y+PI+ A N E +F+Y+++ PTN+ K
Sbjct: 293 ILYSPIVGA-NLVSESFAFAYLSDKAVTPTNKFFK 326
>03_05_0384 -
23671097-23671201,23671343-23671429,23671542-23671660,
23671839-23672077,23672473-23672529,23672634-23672720,
23673147-23673688,23676494-23676691
Length = 477
Score = 29.1 bits (62), Expect = 0.81
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -3
Query: 319 GFDGSDGRVYIVG*EVI--MVQHIASHVLVMMGVAFHYLVGGIEACVCDIGEGKLFMVGI 146
GF G G+V + V+ +++ A VL+ MG A L G +G G++ M+G+
Sbjct: 38 GFVGHIGQVELAAVTVVENVIEGFAYGVLLGMGSALETLCGQA------VGAGQVSMLGV 91
Query: 145 MGRDDWCVC 119
+ W +C
Sbjct: 92 YIQRSWIIC 100
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 217 HYLVGGIEACVCDIGEGKLFMVGIMGRDDW-CVCDQW 110
+Y+ I C D+G G + + +G DW C+ + W
Sbjct: 206 NYVTAVIARCCSDLGGGIVVLSSFVGEFDWMCIKEAW 242
>07_03_0046 + 12781335-12782073,12782254-12783014
Length = 499
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 116 VTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVK 220
+ Y+PI+ N E +F+Y+++ PTN+ K
Sbjct: 252 ILYSPIVEV-NLISESFAFAYLSDKAITPTNKFFK 285
>06_03_0272 +
19053455-19053587,19054665-19056627,19056827-19056887,
19056975-19057198,19057573-19057642,19058453-19058515
Length = 837
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Frame = +2
Query: 62 SPEFQTNLVPYPRIHFPLVT------YA-PIISAH-NAYHEQLSFSY--ITNTCF--YPT 205
SP P++H PL T YA PI A ++YH + + N F +
Sbjct: 271 SPSLNVQSPNIPQVHAPLPTRQNLHGYAEPIPHARASSYHAGAGYPCRNVDNFFFGHHDP 330
Query: 206 NQIVKCYP---HHDKYMTCYMLYHNDFLP 283
+ ++ C+ +H +C+ YH +FLP
Sbjct: 331 DPLLSCHHEGLYHQPVCSCFNCYHREFLP 359
>04_01_0502 - 6587068-6587964
Length = 298
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 113 LVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVK 220
++ Y+P I N E +F+Y++N PTN+ K
Sbjct: 158 VIQYSPTIVV-NLISESFAFAYLSNKAVTPTNKFFK 192
>01_05_0648 +
23915469-23915898,23916551-23916619,23916956-23917315,
23918435-23918973
Length = 465
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 4 SAAAAITASLIFDCTLNVDLTRIPN*LGALP-PYPLPT 114
SAAAA+ A+ +F T DL +P + LP P P PT
Sbjct: 127 SAAAAVEAATLFADTCRADLKSLPE-MRFLPDPPPTPT 163
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 27.5 bits (58), Expect = 2.5
Identities = 7/31 (22%), Positives = 21/31 (67%)
Frame = +2
Query: 182 TNTCFYPTNQIVKCYPHHDKYMTCYMLYHND 274
+N+ ++PT++ YP H+ + + +M++ ++
Sbjct: 279 SNSDWHPTSEYHSVYPEHNSWSSSFMIFEDE 309
>09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616
Length = 695
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 89 PYPRIHFPLVTY---APIISAHNAYHEQLSFSYITNTCF 196
P+P + PL T I HN++H+Q Y N F
Sbjct: 200 PHPNMSMPLGTNPFGVQIAPVHNSHHDQAELPYNNNMLF 238
>06_01_0508 -
3674787-3675140,3675257-3675566,3675672-3675806,
3675891-3676100,3676193-3677359,3677397-3677587
Length = 788
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +2
Query: 134 ISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTC-----YMLYHNDFLPND 289
+S +H+ L S N +P N I+ C HH + C + +DF P D
Sbjct: 417 VSLTRQFHQALDASIAKN---FPENGIIACMSHHTDALYCAKQTAVVRASDDFYPRD 470
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 27.1 bits (57), Expect = 3.3
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 39 RLHSECGPHQNSKLTWCLTP 98
R++S+ GPH+N + W ++P
Sbjct: 526 RINSDSGPHRNPESKWYISP 545
>12_01_0113 -
864380-865027,865419-866408,867128-867194,868377-868468
Length = 598
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 238 VMMGVAFHYLVGGIEACVCDIGEGKLFM 155
+ M + LV G+ CD+G GKL M
Sbjct: 176 IAMNASKEQLVSGLAHLECDVGSGKLRM 203
>04_03_0278 -
13761999-13762462,13762628-13762727,13763065-13763289,
13763347-13763415,13763605-13764432,13764706-13764779,
13818821-13818905
Length = 614
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 113 LVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVK 220
++ Y+PI+ N E +F+Y+++ PT++ K
Sbjct: 100 VILYSPIVGV-NIVSESFAFAYLSDKTITPTDKFFK 134
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 214 YLVGGIEACVCDIGEGKL 161
Y VG I C DIG GK+
Sbjct: 186 YAVGRISGCTVDIGHGKI 203
>02_05_0316 - 27825871-27826509
Length = 212
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 226 VAFHYLVGGIEACVCDIGEGKLFMVGIMGRDD 131
V F LV A VC G+ + + GI GRD+
Sbjct: 97 VRFDELVASAPAAVCGGGDCAVCLSGICGRDE 128
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 116 VTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVK 220
+ Y+P I N E +F+Y+++ PTN+ K
Sbjct: 620 ILYSPTIGG-NLISEYFAFTYLSDKAVTPTNKFFK 653
>07_03_0387 - 17536026-17536636,17536772-17537150
Length = 329
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 67 RIPN*LGALPPYPLPTGHIRTNHLCP 144
R+ LG PP PLP+ T H+ P
Sbjct: 196 RVSTVLGVAPPPPLPSPPPSTQHVSP 221
>04_01_0312 +
4206400-4206627,4206661-4207269,4207425-4207902,
4208006-4208297,4209278-4209569,4210013-4210465
Length = 783
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 116 VTYAPIISAHNAYHEQLSFSYITNTCFYPTNQ 211
+ Y+P + A N E +F+Y+++ PTN+
Sbjct: 287 ILYSPTVGA-NLVSESFAFAYLSDKAVTPTNK 317
>01_07_0009 -
40397276-40397534,40397637-40398745,40398834-40398932,
40399043-40399272,40399534-40399585,40399679-40399865,
40399987-40400193,40400283-40400449,40400804-40401094,
40401166-40401636
Length = 1023
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 101 IHFPLVTYAPIISAHNAYHEQLSFSYIT 184
I P YAP+I A +AY +SF ++
Sbjct: 225 IREPAEEYAPVIFAQDAYKHVISFDMLS 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,796,686
Number of Sequences: 37544
Number of extensions: 245542
Number of successful extensions: 567
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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