Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2139
(321 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 138 7e-34
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 2e-33
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 137 2e-33
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 137 2e-33
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 137 2e-33
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 137 2e-33
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 9e-33
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 134 1e-32
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 134 1e-32
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 3e-32
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 132 6e-32
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 8e-32
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 1e-31
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 1e-29
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-27
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 80 3e-16
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 50 4e-07
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 50 4e-07
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 50 6e-07
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 7e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 45 2e-05
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 44 2e-05
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 31 0.16
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 30 0.36
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.84
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 29 1.1
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 1.1
SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0) 28 1.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_23493| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 26 5.9
SB_38778| Best HMM Match : HRM (HMM E-Value=4.6) 26 5.9
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 26 5.9
SB_40818| Best HMM Match : EGF_2 (HMM E-Value=4.4) 26 5.9
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.9
SB_31093| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.9
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 138 bits (335), Expect = 7e-34
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+NSSI TIKT
Sbjct: 314 ACCLLYRGDVVPKDVNSSIATIKT 337
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 263
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 137 bits (332), Expect = 2e-33
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 191 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 250
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C MLY D +P D+N++I TIKT
Sbjct: 251 ACCMLYRGDVVPKDVNAAIATIKT 274
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 169 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 200
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 137 bits (332), Expect = 2e-33
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C MLY D +P D+N++I TIKT
Sbjct: 314 ACCMLYRGDVVPKDVNAAIATIKT 337
Score = 135 bits (326), Expect = 9e-33
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN CF P NQ+VKC P H KYM
Sbjct: 687 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYM 746
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I TIKT
Sbjct: 747 ACCLLYRGDVVPKDVNAAIATIKT 770
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 263
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 665 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 696
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 137 bits (332), Expect = 2e-33
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 318 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 377
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C MLY D +P D+N++I TIKT
Sbjct: 378 ACCMLYRGDVVPKDVNAAIATIKT 401
Score = 136 bits (329), Expect = 4e-33
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 839 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 898
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I TIKT
Sbjct: 899 ACCLLYRGDVVPKDVNAAIATIKT 922
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 296 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 327
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 817 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 848
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 137 bits (332), Expect = 2e-33
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 179 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 238
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C MLY D +P D+N++I TIKT
Sbjct: 239 ACCMLYRGDVVPKDVNAAIATIKT 262
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 157 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 188
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 137 bits (332), Expect = 2e-33
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 52 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 111
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C MLY D +P D+N++I TIKT
Sbjct: 112 ACCMLYRGDVVPKDVNAAIATIKT 135
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 30 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 61
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 135 bits (326), Expect = 9e-33
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN CF P NQ+VKC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I TIKT
Sbjct: 314 ACCLLYRGDVVPKDVNAAIATIKT 337
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 263
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 134 bits (325), Expect = 1e-32
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN CF P NQ+VKC P H KYM
Sbjct: 52 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYM 111
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I TIKT
Sbjct: 112 ACCLLYRGDVVPKDVNAAIATIKT 135
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 30 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 61
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 134 bits (325), Expect = 1e-32
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN CF P NQ+VKC P H KYM
Sbjct: 253 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYM 312
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I TIKT
Sbjct: 313 ACCLLYRGDVVPKDVNAAIATIKT 336
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 231 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 262
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 133 bits (322), Expect = 3e-32
Identities = 55/84 (65%), Positives = 67/84 (79%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFP+ +YAP++SA AYHEQL+ + ITN+CF P NQ+VKC P H KYM
Sbjct: 625 EFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQMVKCDPRHGKYM 684
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+NS+I TIKT
Sbjct: 685 ACCLLYRGDVVPKDVNSAIATIKT 708
Score = 87.4 bits (207), Expect = 2e-18
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQI 214
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN CF P NQ+
Sbjct: 1058 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 1106
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 1036 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 1067
Score = 29.5 bits (63), Expect = 0.64
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDLT L PYP
Sbjct: 607 SSITASLRFDGALNVDLTEFQT---NLVPYP 634
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 132 bits (319), Expect = 6e-32
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN+CF P NQ+VKC P H KYM
Sbjct: 179 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPANQMVKCDPRHGKYM 238
Query: 248 TCYMLYHNDFLPNDINSSITTIK 316
C +LY D +P D+N++I TI+
Sbjct: 239 ACCLLYRGDVVPKDVNAAIATIR 261
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 157 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 188
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 132 bits (318), Expect = 8e-32
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFP+ TYAPIISA AYHE ++ S +TN CF P NQ+VKC P H KYM
Sbjct: 219 EFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDPRHGKYM 278
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I TIKT
Sbjct: 279 ACCLLYRGDVVPKDVNAAIATIKT 302
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 197 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 228
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 131 bits (317), Expect = 1e-31
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + IT +CF P NQ+VKC P H KYM
Sbjct: 239 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTSCFEPANQMVKCDPRHGKYM 298
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +L+ D +P D+N++I TIKT
Sbjct: 299 ACCLLFRGDVVPKDVNAAIATIKT 322
Score = 130 bits (314), Expect = 2e-31
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFP+ TYAPIISA AYHE ++ S +TN CF P NQ+VKC P H KYM
Sbjct: 670 EFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDPRHGKYM 729
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +L+ D +P D+N++I TIKT
Sbjct: 730 ACCLLFRGDVVPKDVNAAIATIKT 753
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 217 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 248
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 124 bits (300), Expect = 1e-29
Identities = 52/83 (62%), Positives = 63/83 (75%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+I A AYHE +S + IT+ CF P+NQ+VKC P + KYM
Sbjct: 385 EFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQMVKCDPRYGKYM 444
Query: 248 TCYMLYHNDFLPNDINSSITTIK 316
C +LY D +P D+NS+I IK
Sbjct: 445 ACCLLYRGDVVPKDVNSAIAAIK 467
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G +++TASL FD LNVDLT L PYP
Sbjct: 363 GQIVSSVTASLRFDGALNVDLTEFQT---NLVPYP 394
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 116 bits (280), Expect = 3e-27
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPLVTYAP+IS AYHEQL+ + ITN CF P NQ+VKC P H KYM
Sbjct: 1165 EFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMCFDPNNQMVKCDPRHGKYM 1224
Query: 248 TCYMLYHND 274
C MLY D
Sbjct: 1225 ACCMLYRGD 1233
Score = 30.3 bits (65), Expect = 0.36
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++IT+SL FD LNVDLT L PYP
Sbjct: 1143 GQIVSSITSSLRFDGALNVDLTEFQT---NLVPYP 1174
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 80.2 bits (189), Expect = 3e-16
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA AYHEQL+ + ITN + +++
Sbjct: 244 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNGIL---SNVIR-VTASTWLA 299
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
CY D + D+N++I TIKT
Sbjct: 300 VCYS--EGDVVLKDVNAAIATIKT 321
Score = 29.5 bits (63), Expect = 0.64
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G +++TASL FD +LNVDL L PYP
Sbjct: 222 GQIVSSVTASLRFDGSLNVDLNEFQT---NLVPYP 253
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 50.0 bits (114), Expect = 4e-07
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ S + + L+ +T F N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGRMSMKEVDEQMLNVQ 334
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 50.0 bits (114), Expect = 4e-07
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ S + + L+ +T F N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGRMSMKEVDEQMLNVQ 334
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 49.6 bits (113), Expect = 6e-07
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 83 LVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYML 262
+VP+PR+HF + +AP+ S N ++ +S +T F N + C P H +Y+T +
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 263 Y 265
+
Sbjct: 61 F 61
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 49.2 bits (112), Expect = 7e-07
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N++PYPR+HF + +AP+ S + L+ + +T F N ++ C P KY+T
Sbjct: 161 NMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAIFDNKNLLIACNPKRGKYLTYAA 220
Query: 260 LY 265
+Y
Sbjct: 221 MY 222
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
E NLVP+P++H+ + + P+ + + + F +Q++K P H+ Y+
Sbjct: 301 EITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFSKDHQLIKADPKHNLYL 360
Query: 248 TCYMLYHNDFLPNDINSSITTIK 316
C ++ + +DI +I +K
Sbjct: 361 ACALILRGNVEVSDIRRNIERLK 383
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+ F + +AP+ S + + L+ +T F N + C P H +Y+T
Sbjct: 201 NMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPLHGRYLTVAA 260
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 261 MFRGRMSMKELDEQMLNVQ 279
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 107 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 138
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 30.3 bits (65), Expect = 0.36
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 138 LPIMPTMNSFPSPISQTHASIPPTK**NATPIMTS 242
+P P +N PSP S+T +S+PP + TP++ S
Sbjct: 88 IPAKPALN-LPSPPSKTPSSVPPQAKVDETPLLPS 121
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.1 bits (62), Expect = 0.84
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 138 LPIMPTMNSFPSPISQTHASIPPTK**NATPIM 236
+P P +N PSP S+T +S+PP + TP++
Sbjct: 88 IPAKPALN-LPSPPSKTPSSVPPQAKVDETPLL 119
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 182 TNTCFYPTNQIVKCYPHHDKYMTCYMLY 265
T+ C+ NQ CY HD+ CY Y
Sbjct: 140 TSPCYSDHNQTSPCYSDHDQTPPCYSDY 167
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 272 HYGTAYSKSCTCHDGGSISLF-GWWDRSMC 186
+YG K+C C GS+S F G W + C
Sbjct: 424 YYGYPNCKACNCDTRGSLSTFCGSWGQCQC 453
>SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 566
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 277 EVIMVQHIASHVLVMMGVAFHYLVGGIEACVCDIGEGKLFMVGIMGRDDWCV 122
E ++QH V++GV I ACV G+G+ IM D+WC+
Sbjct: 468 EASLMQHPLLARAVVIGVPDQVFYQEICACVEFHGKGEDASTKIMELDNWCI 519
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 141 PIMPTMNSFPSPISQTHASIPPTK**NATPIMTST*LAICCTIMTSYPTI*TLPSLPSKP 320
PI P+ S PS S S+P T +TP ST C S P+ ++PS PS P
Sbjct: 240 PITPSTPSTPSTPSTP--SMPSTP---STPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTP 294
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 141 PIMPTMNSFPSPISQTHASIPPTK**NATPIMTST*LAICCTIMTSYPTI*TLPSLPSKP 320
PI P+ S PS S S+P T +TP ST C S P+ ++PS PS P
Sbjct: 790 PITPSTPSTPSTPSTP--SMPSTP---STPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTP 844
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 150 PTMNSFPSPISQTHASIPPTK**NATPIMTS 242
P +N PSP S+T +S+PP + TP++ S
Sbjct: 52 PALN-LPSPPSKTPSSVPPQAKVDETPVLPS 81
>SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 152 YHEQLSFSYITNTCFYPTNQIVKCYPHHDK--YMTCYMLYHN 271
Y + + + N+C YP + +V Y + Y T L+HN
Sbjct: 2 YSAPVQYGFDNNSCSYPVHPVVNPYGYQPAGLYSTVPPLHHN 43
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 138 LPIMPTMNSFPSPISQTHASIPP 206
+P P++N PSP S+T +S+PP
Sbjct: 548 IPAKPSLN-LPSPPSKTPSSVPP 569
>SB_23493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 137 SAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFLPNDINSSITTI 313
+A+N Y + S+ Y NT YP K Y + + +L +DF + ++SS TT+
Sbjct: 360 AAYNKYFQWRSY-YKRNTQHYPICNFCKSYALNHDLRSTKILDLDDFWFSCLDSSDTTL 417
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
Frame = -3
Query: 136 DDWCVCDQW-EVDTGVRH 86
D WC C W +DTG H
Sbjct: 160 DHWCPCHTWRNIDTGSAH 177
>SB_38778| Best HMM Match : HRM (HMM E-Value=4.6)
Length = 331
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 115 QWEVDTGVRHQVSLEFW*GPHSEC 44
+W TG+RHQV ++ W S C
Sbjct: 247 KWVSKTGLRHQVGVQDWSPTSSGC 270
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 102 IRG*GTKLVWNSGEVHIQSAVEYQR 28
+RG G L+ NSGE+ I ++Y+R
Sbjct: 1129 VRGRGHLLLVNSGEISIARKLDYER 1153
>SB_40818| Best HMM Match : EGF_2 (HMM E-Value=4.4)
Length = 166
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 266 GTAYSKSCTCHDGGSISLFGWWDRSMC 186
G S C CH GG + FG D MC
Sbjct: 13 GFGESDICMCHVGGFVGGFGEPDICMC 39
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
Frame = -3
Query: 136 DDWCVCDQW-EVDTGVRH 86
D WC C W +DTG H
Sbjct: 617 DHWCPCHTWRNIDTGSAH 634
>SB_31093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 179 ITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFL 280
I +TC + PH K+ YMLY ++L
Sbjct: 74 IASTC--TLEDVASASPHSPKWFLIYMLYDKEYL 105
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 25.8 bits (54), Expect = 7.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPI 133
+L+P PR+HF + Y P+
Sbjct: 295 SLIPTPRLHFLMTGYTPL 312
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,599,660
Number of Sequences: 59808
Number of extensions: 251421
Number of successful extensions: 730
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 425519554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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