Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2139
(321 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 1e-32
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 126 3e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 126 3e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 126 3e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 126 3e-30
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 125 8e-30
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 125 8e-30
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 123 3e-29
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 123 3e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 123 3e-29
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 123 3e-29
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 122 4e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 115 9e-27
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 115 9e-27
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 113 4e-26
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 107 1e-24
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 56 4e-09
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 56 4e-09
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 50 3e-07
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 48 1e-06
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 48 2e-06
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 0.75
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 0.75
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 28 1.7
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 28 1.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 3.0
U55857-2|AAA98027.2| 397|Caenorhabditis elegans Hypothetical pr... 27 3.0
AF038622-3|AAL06048.1| 254|Caenorhabditis elegans Hypothetical ... 27 3.0
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 27 4.0
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 26 5.3
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 26 5.3
AL110490-10|CAB54446.1| 430|Caenorhabditis elegans Hypothetical... 26 5.3
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 26 5.3
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 26 5.3
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 26 5.3
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 26 5.3
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81027-2|CAB02687.1| 282|Caenorhabditis elegans Hypothetical pr... 25 9.2
U70853-8|AAB09145.3| 191|Caenorhabditis elegans Hypothetical pr... 25 9.2
U70853-7|ABQ13066.1| 228|Caenorhabditis elegans Hypothetical pr... 25 9.2
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (324), Expect = 1e-32
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPLVTYAPIISA AYHEQLS S ITN CF P +Q+VKC P + KYM
Sbjct: 254 EFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P +INS+I+TIKT
Sbjct: 314 ACCLLYRGDVVPKEINSAISTIKT 337
Score = 29.5 bits (63), Expect = 0.56
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDLT L PYP
Sbjct: 236 SSITASLRFDGALNVDLTEFQT---NLVPYP 263
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 126 bits (305), Expect = 3e-30
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL T++P+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+L+ D +P D+N++I TIKT
Sbjct: 314 AVCLLFRGDVVPKDVNAAIATIKT 337
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 263
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 126 bits (305), Expect = 3e-30
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL T++P+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 253 EFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYM 312
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+L+ D +P D+N++I TIKT
Sbjct: 313 AVCLLFRGDVVPKDVNAAIATIKT 336
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 231 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 262
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 126 bits (305), Expect = 3e-30
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL T++P+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+L+ D +P D+N++I TIKT
Sbjct: 314 AVCLLFRGDVVPKDVNAAIATIKT 337
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 263
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 126 bits (305), Expect = 3e-30
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL T++P+ISA AYHEQLS + ITN CF P NQ+VKC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+L+ D +P D+N++I TIKT
Sbjct: 314 AVCLLFRGDVVPKDVNAAIATIKT 337
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GSAAAAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
G ++ITASL FD LNVDLT L PYP
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQT---NLVPYP 263
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 125 bits (301), Expect = 8e-30
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL Y P+ISA AYHE LS S ITN+CF P NQ+VKC P H KYM
Sbjct: 252 EFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYM 311
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D+N++I IKT
Sbjct: 312 AVCLLYRGDVVPKDVNTAIAAIKT 335
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 234 SSITASLRFDGALNVDLNEFQT---NLVPYP 261
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 125 bits (301), Expect = 8e-30
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL Y P+ISA AYHE LS S ITN+CF P NQ+VKC P H KYM
Sbjct: 252 EFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYM 311
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D+N++I IKT
Sbjct: 312 AVCLLYRGDVVPKDVNTAIAAIKT 335
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 234 SSITASLRFDGALNVDLNEFQT---NLVPYP 261
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 123 bits (297), Expect = 3e-29
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL Y P+ISA AYHE LS + ITN+CF P NQ+VKC P H KYM
Sbjct: 252 EFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYM 311
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D+N++I IKT
Sbjct: 312 AVCLLYRGDVVPKDVNTAIAAIKT 335
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 234 SSITASLRFDGALNVDLNEFQT---NLVPYP 261
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 123 bits (297), Expect = 3e-29
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL +Y P+ISA AYHE LS + ITN+CF P NQ+VKC P + KYM
Sbjct: 252 EFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYM 311
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D+N++IT IKT
Sbjct: 312 AVCLLYRGDVVPKDVNTAITAIKT 335
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 234 SSITASLRFDGALNVDLNEFQT---NLVPYP 261
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 123 bits (297), Expect = 3e-29
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL Y P+ISA AYHE LS + ITN+CF P NQ+VKC P H KYM
Sbjct: 252 EFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYM 311
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D+N++I IKT
Sbjct: 312 AVCLLYRGDVVPKDVNTAIAAIKT 335
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 234 SSITASLRFDGALNVDLNEFQT---NLVPYP 261
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 123 bits (297), Expect = 3e-29
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL +Y P+ISA AYHE LS + ITN+CF P NQ+VKC P + KYM
Sbjct: 252 EFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYM 311
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D+N++IT IKT
Sbjct: 312 AVCLLYRGDVVPKDVNTAITAIKT 335
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 234 SSITASLRFDGALNVDLNEFQT---NLVPYP 261
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 122 bits (295), Expect = 4e-29
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAPIISA AYHEQ++ + IT CF P Q+VKC P KYM
Sbjct: 259 EFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYM 318
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C +LY D +P D+N++I ++KT
Sbjct: 319 ACCLLYRGDVVPKDVNAAIASVKT 342
Score = 29.1 bits (62), Expect = 0.75
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++TASL FD LNVDLT L PYP
Sbjct: 241 SSVTASLRFDGALNVDLTEFQT---NLVPYP 268
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 115 bits (276), Expect = 9e-27
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPLVTYAP++SA A HEQ + S +T+ CF P Q+VKC P KYM
Sbjct: 260 EFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYM 319
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P DINS+I +KT
Sbjct: 320 AVCLLYRGDVVPKDINSAIAAVKT 343
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL F+ LNVDLT L PYP
Sbjct: 242 SSITASLRFEGALNVDLTEFQT---NLVPYP 269
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 115 bits (276), Expect = 9e-27
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPLVTYAP++SA A HEQ + S +T+ CF P Q+VKC P KYM
Sbjct: 232 EFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYM 291
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P DINS+I +KT
Sbjct: 292 AVCLLYRGDVVPKDINSAIAAVKT 315
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL F+ LNVDLT L PYP
Sbjct: 214 SSITASLRFEGALNVDLTEFQT---NLVPYP 241
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 113 bits (271), Expect = 4e-26
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPL TYAP+ISA A+HE LS IT+ CF NQ+VKC P KYM
Sbjct: 257 EFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYM 316
Query: 248 TCYMLYHNDFLPNDINSSITTIK 316
+LY D +P D+N++I+++K
Sbjct: 317 AVCLLYRGDVVPKDVNAAISSVK 339
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 239 SSITASLRFDGALNVDLNEFQT---NLVPYP 266
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 107 bits (258), Expect = 1e-24
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHFPLV Y P+IS+ A+HE LS IT +CF +NQ+VKC P H KYM
Sbjct: 251 EFQTNLVPYPRIHFPLVAYNPLISS--AHHEFLSVDEITKSCFEASNQMVKCDPKHGKYM 308
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
+LY D +P D++++I +IKT
Sbjct: 309 AVCLLYRGDVVPKDVSAAIKSIKT 332
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
++ITASL FD LNVDL L PYP
Sbjct: 233 SSITASLRFDGALNVDLNEFQT---NLVPYP 260
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 56.4 bits (130), Expect = 4e-09
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ S N + ++ +T CF N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + I+
Sbjct: 316 IFRGRMSMKEVDEQMLNIQ 334
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 56.4 bits (130), Expect = 4e-09
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ S N + ++ +T CF N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + I+
Sbjct: 316 IFRGRMSMKEVDEQMLNIQ 334
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 50.4 bits (115), Expect = 3e-07
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ S + + L+ +T F N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGRMSMKEVDEQMLNVQ 334
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ + + L+ + +T F N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGRMSMREVDEQMLNVQ 334
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ + + L+ + +T F N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + +++
Sbjct: 316 MFRGRMSMREVDEQMLSVQ 334
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 47.6 bits (108), Expect = 2e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N+VP+PR+HF + +AP+ + + L+ + +T F N + C P H +Y+T
Sbjct: 256 NMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGRMSMREVDDQMMNVQ 334
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIV 217
+L P+P +HF +P++ + + + S + +T PT+ +V
Sbjct: 259 DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMV 304
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIV 217
+L P+P +HF +P++ + + + S + +T PT+ +V
Sbjct: 259 DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMV 304
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N PR+HF + ++AP+ + S S +T N I+ C + K+++ +
Sbjct: 255 NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKN-IMTCNHNQGKFLSSAI 313
Query: 260 LY 265
+Y
Sbjct: 314 IY 315
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
N PR+HF + ++AP+ + S S +T N I+ C + K+++ +
Sbjct: 255 NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKN-IMTCNHNQGKFLSSAI 313
Query: 260 LY 265
+Y
Sbjct: 314 IY 315
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 141 PIMPTMNSFPSPISQTHASIPP 206
P +P S P PI Q +SIPP
Sbjct: 745 PSLPRSASTPQPIQQQQSSIPP 766
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 141 PIMPTMNSFPSPISQTHASIPP 206
P +P S P PI Q +SIPP
Sbjct: 745 PSLPRSASTPQPIQQQQSSIPP 766
>U55857-2|AAA98027.2| 397|Caenorhabditis elegans Hypothetical
protein K08D10.9 protein.
Length = 397
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/30 (30%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYA--PIISAHNA 151
EF +++P+ +++P+V YA P++S + +
Sbjct: 37 EFDESVIPFAGLNYPIVNYAVNPLVSGNGS 66
>AF038622-3|AAL06048.1| 254|Caenorhabditis elegans Hypothetical
protein R07C12.4 protein.
Length = 254
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/30 (30%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYA--PIISAHNA 151
EF +++P+ +++P+V YA P++S + +
Sbjct: 122 EFDESVIPFAGLNYPIVNYAVNPLVSGNGS 151
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTCHDGGSISLF 210
WV++H Y + CT H G + +F
Sbjct: 447 WVKNH-ANPYFRKCTIHSGKDVGVF 470
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTC----HDGGSISLFGWWDRSMCL*YRRRKAVHGR 150
WVR G+ YS C H GGS+ ++G + + RR +++ R
Sbjct: 101 WVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTSTSMGPLRRIQSIMDR 149
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTC----HDGGSISLFGWWDRSMCL*YRRRKAVHGR 150
WVR G+ YS C H GGS+ ++G + + RR +++ R
Sbjct: 171 WVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTSTSMGPLRRIQSIMDR 219
>AL110490-10|CAB54446.1| 430|Caenorhabditis elegans Hypothetical
protein Y48B6A.10 protein.
Length = 430
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 72 NSGEVHIQSAVEYQRSSDRGGGG 4
N G +H++S Y SDR G G
Sbjct: 103 NQGVIHVKSKDRYVLGSDRAGAG 125
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTC----HDGGSISLFGWWDRSMCL*YRRRKAVHGR 150
WVR G+ YS C H GGS+ ++G + + RR +++ R
Sbjct: 171 WVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTSTSMGPLRRIQSIMDR 219
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTC----HDGGSISLFGWWDRSMCL*YRRRKAVHGR 150
WVR G+ YS C H GGS+ ++G + + RR +++ R
Sbjct: 101 WVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTSTSMGPLRRIQSIMDR 149
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTC----HDGGSISLFGWWDRSMCL*YRRRKAVHGR 150
WVR G+ YS C H GGS+ ++G + + RR +++ R
Sbjct: 101 WVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTSTSMGPLRRIQSIMDR 149
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 284 WVRSHYGTAYSKSCTC----HDGGSISLFGWWDRSMCL*YRRRKAVHGR 150
WVR G+ YS C H GGS+ ++G + + RR +++ R
Sbjct: 171 WVRRPVGSRYSPKYQCPTVKHGGGSVMVWGCFTSTSMGPLRRIQSIMDR 219
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +2
Query: 59 TSPEFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKC 223
++P F+T++VPY R +V A + N + + +++VKC
Sbjct: 754 STPVFKTDIVPYERCTEVVVEQATLTLGGNVNFNDVQQEQVVKNLTSLRSKMVKC 808
>Z81027-2|CAB02687.1| 282|Caenorhabditis elegans Hypothetical
protein AH10.3 protein.
Length = 282
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 248 TCYMLYHNDFLPNDINSSITTI 313
TC +L HN L + +NS++T +
Sbjct: 202 TCVLLIHNSMLSSLLNSNLTLL 223
>U70853-8|AAB09145.3| 191|Caenorhabditis elegans Hypothetical
protein M01H9.4a protein.
Length = 191
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 95 PRIHFPLVTYAPIISAHNAYHEQLSF 172
P + FPL+ Y +I +H+Q+ +
Sbjct: 18 PNVGFPLMQYCQMIQQMQHHHQQMEY 43
>U70853-7|ABQ13066.1| 228|Caenorhabditis elegans Hypothetical
protein M01H9.4b protein.
Length = 228
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 95 PRIHFPLVTYAPIISAHNAYHEQLSF 172
P + FPL+ Y +I +H+Q+ +
Sbjct: 55 PNVGFPLMQYCQMIQQMQHHHQQMEY 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,556,265
Number of Sequences: 27780
Number of extensions: 188890
Number of successful extensions: 523
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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