Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2139
(321 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 118 1e-27
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 118 1e-27
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 118 1e-27
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 118 1e-27
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 117 2e-27
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 117 2e-27
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 111 1e-25
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 49 6e-07
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 49 6e-07
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 49 8e-07
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 48 1e-06
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 48 1e-06
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 48 1e-06
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 48 1e-06
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 48 1e-06
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 48 1e-06
At5g66530.1 68418.m08388 aldose 1-epimerase family protein simil... 29 0.92
At1g62240.1 68414.m07021 expressed protein 28 1.2
At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase fa... 28 1.6
At3g02590.1 68416.m00250 delta 7-sterol-C5-desaturase, putative ... 27 2.1
At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase fa... 27 2.1
At5g54510.1 68418.m06787 auxin-responsive GH3 protein, putative ... 27 2.8
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 27 2.8
At3g02580.1 68416.m00249 delta 7-sterol-C5-desaturase (STE1) ide... 27 2.8
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 27 3.7
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t... 27 3.7
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 26 4.9
At1g27800.1 68414.m03403 hypothetical protein 26 4.9
At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1) ident... 26 6.5
At4g27260.1 68417.m03913 auxin-responsive GH3 family protein sim... 26 6.5
At4g01265.1 68417.m00167 raffinose synthase family protein / see... 26 6.5
At1g78230.1 68414.m09116 leucine-rich repeat family protein 26 6.5
At1g13600.1 68414.m01595 bZIP transcription factor family protei... 26 6.5
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 25 8.6
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 25 8.6
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 25 8.6
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 25 8.6
At4g12740.1 68417.m02001 adenine-DNA glycosylase-related / MYH-r... 25 8.6
At2g14777.1 68415.m01672 hypothetical protein No suitable start ... 25 8.6
At1g28130.2 68414.m03447 auxin-responsive GH3 family protein sim... 25 8.6
At1g28130.1 68414.m03446 auxin-responsive GH3 family protein sim... 25 8.6
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 118 bits (283), Expect = 1e-27
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA A+HEQLS + ITN+ F P + + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKT 337
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++TASL FD LNVD+T L PYP
Sbjct: 236 SSLTASLRFDGALNVDVTEFQT---NLVPYP 263
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 118 bits (283), Expect = 1e-27
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA A+HEQLS + ITN+ F P + + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKT 337
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++TASL FD LNVD+T L PYP
Sbjct: 236 SSLTASLRFDGALNVDVTEFQT---NLVPYP 263
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 118 bits (283), Expect = 1e-27
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA A+HEQLS + ITN+ F P + + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKT 337
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++TASL FD LNVD+T L PYP
Sbjct: 236 SSLTASLRFDGALNVDVTEFQT---NLVPYP 263
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 118 bits (283), Expect = 1e-27
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA A+HEQLS + ITN+ F P + + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKT 337
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++TASL FD LNVD+T L PYP
Sbjct: 236 SSLTASLRFDGALNVDVTEFQT---NLVPYP 263
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 117 bits (281), Expect = 2e-27
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA AYHEQLS ITN F P + + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKT 337
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++T SL FD +NVD+T L PYP
Sbjct: 236 SSLTTSLRFDGAINVDITEFQT---NLVPYP 263
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 117 bits (281), Expect = 2e-27
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+ISA AYHEQLS ITN F P + + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIKT 319
C ++Y D +P D+N+++ TIKT
Sbjct: 314 ACCLMYRGDVVPKDVNAAVGTIKT 337
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++T SL FD +NVD+T L PYP
Sbjct: 236 SSLTTSLRFDGAINVDITEFQT---NLVPYP 263
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 111 bits (267), Expect = 1e-25
Identities = 46/83 (55%), Positives = 59/83 (71%)
Frame = +2
Query: 68 EFQTNLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
EFQTNLVPYPRIHF L +YAP+IS+ AYHEQ S IT + F P+N + KC P H KYM
Sbjct: 254 EFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYM 313
Query: 248 TCYMLYHNDFLPNDINSSITTIK 316
C ++Y D +P D+N+++ IK
Sbjct: 314 ACCLMYRGDVVPKDVNTAVAAIK 336
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 13 AAITASLIFDCTLNVDLTRIPN*LGALPPYP 105
+++T SL FD +NVD+T L PYP
Sbjct: 236 SSLTTSLRFDGAINVDITEFQT---NLVPYP 263
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 49.2 bits (112), Expect = 6e-07
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + LS +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + I+
Sbjct: 316 VFRGKLSTKEVDEQMMNIQ 334
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 49.2 bits (112), Expect = 6e-07
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 257 NLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASA 316
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ I I+
Sbjct: 317 IFRGQMSTKEVDEQILNIQ 335
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 48.8 bits (111), Expect = 8e-07
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + LS +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 VFRGKMSTKEVDEQMMNVQ 334
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMLNVQ 334
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 48.4 bits (110), Expect = 1e-06
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 257 NLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASA 316
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ I ++
Sbjct: 317 MFRGKMSTKEVDEQILNVQ 335
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 48.0 bits (109), Expect = 1e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMINVQ 334
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 48.0 bits (109), Expect = 1e-06
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = +2
Query: 80 NLVPYPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYM 259
NL+P+PR+HF +V +AP+ S + + L+ +T + N + P H +Y+T
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASA 315
Query: 260 LYHNDFLPNDINSSITTIK 316
++ +++ + ++
Sbjct: 316 MFRGKMSTKEVDEQMINVQ 334
>At5g66530.1 68418.m08388 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044; contains Pfam profile PF01263:
Aldose 1-epimerase
Length = 307
Score = 28.7 bits (61), Expect = 0.92
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -3
Query: 205 GGIEACVCDIGEGKLFMVGIMGRDDWCVCDQWEVDTGVRHQVSLEFW*GPHS 50
GGI C G G + G DW V D D V+LE GP+S
Sbjct: 95 GGIPHCFPQFGPGLIQQHGFGRNMDWSVVDSQNADDNA--AVTLELKDGPYS 144
>At1g62240.1 68414.m07021 expressed protein
Length = 227
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 129 GAYVTSGKWIRG*GTKLVWNSGEVHIQSAVEYQRSSDRGGGG 4
G+ ++G + G G+ + SG+ + S+ EY S+ GG G
Sbjct: 109 GSGGSNGSFFNGSGSGTGYGSGDGRVSSSGEYSASAGGGGSG 150
>At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 594
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 75 WNSGEVHIQSAVEYQRSSDRGGGG 4
WN G+++ +Y +SDR GG
Sbjct: 485 WNEGKIYFPPTYKYSNNSDRYAGG 508
>At3g02590.1 68416.m00250 delta 7-sterol-C5-desaturase, putative
similar to delta7 sterol C-5 desaturase GI:5031219 from
[Arabidopsis thaliana]
Length = 279
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +2
Query: 92 YPRIHFPLVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPH 232
+ +H Y + + H+ Y++Q + S F+P + I++ PH
Sbjct: 148 HKELHDIKFLYKHLHATHHMYNKQNTLSPFAGLAFHPLDGILQAIPH 194
>At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase
family protein simlar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 585
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 75 WNSGEVHIQSAVEYQRSSDRGGG 7
WN G+++ +Y R+SDR G
Sbjct: 476 WNEGKIYFPPTYKYSRNSDRYSG 498
>At5g54510.1 68418.m06787 auxin-responsive GH3 protein, putative
(DFL-1) identical to auxin-responsive GH3 homologue
[Arabidopsis thaliana] GI:11041726; similar to
auxin-responsive GH3 product [Glycine max] GI:18591;
contains Pfam profile PF03321: GH3 auxin-responsive
promoter
Length = 612
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +2
Query: 122 YAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFLPNDINSS 301
Y P + ++ + Y ++ C++ N C P Y + + +FLP NS
Sbjct: 320 YIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSG 379
Query: 302 ITT 310
+T+
Sbjct: 380 VTS 382
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 138 LPIMPTMNSFPSPISQTHASIPPTK**NATPIMTST*LAIC--CTIMTSYPTI*TLPSLP 311
+P +PT P+P+ + S+PP P + + L + PTI TLP LP
Sbjct: 278 IPSIPTPTLPPNPLIPSPPSLPPIPLIPTPPTLPTIPLLPTPPTPTLPPIPTIPTLPPLP 337
Query: 312 SKP 320
P
Sbjct: 338 VLP 340
>At3g02580.1 68416.m00249 delta 7-sterol-C5-desaturase (STE1)
identical to sterol-C5-desaturase GB:AAD12944 GI:4234768
from [Arabidopsis thaliana]
Length = 281
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 122 YAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPH 232
Y + + H+ Y++Q + S F+P + I++ PH
Sbjct: 157 YKYLHATHHIYNKQNTLSPFAGLAFHPVDGILQAVPH 193
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 214 YLVGGIEACVCDIGEGKLFMVGIM 143
Y VG I C DIG GK+ + ++
Sbjct: 131 YAVGRISGCTVDIGHGKIDIAPVL 154
>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
GB:AAC39463 from [Zea mays], PF00076 RNA recognition
motif (2 copies)
Length = 615
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +2
Query: 146 NAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFLPNDINS 298
N Y ++L + C + I + + H+ + Y Y +LP D N+
Sbjct: 417 NKYSQKLLLDMLDKHCIHINEAITEEHNKHESHHQPYSSYDFVYLPMDFNN 467
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 64 TRIPN*LGALPPYPLPTGHIRTN---HLCP*CL 153
+RIPN ++PPYP + + + LCP CL
Sbjct: 418 SRIPNFEPSVPPYPFESKQMSSADDIQLCPICL 450
>At1g27800.1 68414.m03403 hypothetical protein
Length = 211
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 302 WKSLYRWVRSHYGTAYSKSCTCHDGGSISLFGWWDRSMCL*Y 177
W+ +R+V H + + CT H G + F W+ R M + Y
Sbjct: 173 WERSWRFV--HLPSCVGQ-CTFHHGCRVCFFYWYAREMAIFY 211
>At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1)
identical to pseudo-response regulator 1 GI:7576354 from
[Arabidopsis thaliana]; timing of CAB expression 1
protein (TOC1) GI:9247019; contains Pfam profile
PF00072: Response regulator receiver domain; identical
to cDNA ABI3-interacting protein 1 (aip1 gene)
GI:6996312
Length = 618
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 206 NQIVKCYPHHDKYMTCYMLYHN 271
+QI C P+H MT Y YH+
Sbjct: 468 HQIPHCQPNHPNGMTGYPYYHH 489
>At4g27260.1 68417.m03913 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 612
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/62 (20%), Positives = 26/62 (41%)
Frame = +2
Query: 122 YAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFLPNDINSS 301
Y P + ++ + Y ++ C++ N C P Y + + +FLP N+
Sbjct: 320 YIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNG 379
Query: 302 IT 307
+T
Sbjct: 380 VT 381
>At4g01265.1 68417.m00167 raffinose synthase family protein / seed
imbibition protein-related similar to seed imbibition
protein [Arabidopsis thaliana] GI:10834552; contains
Pfam profile PF05691: Raffinose synthase or seed
imbibition protein Sip1
Length = 301
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 152 YHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHND 274
YH+ L S N +P N I+ C H+ + + +H D
Sbjct: 214 YHQALEASISRN---FPANGIIACMSHNTDGLYRQLFWHRD 251
>At1g78230.1 68414.m09116 leucine-rich repeat family protein
Length = 676
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 122 YAPIISAHN-AYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYM 247
Y + HN + HE+ S TN C TNQ +PHH++++
Sbjct: 313 YTSDFAEHNQSSHEEES----TNYCADFTNQSSNLWPHHNQWV 351
>At1g13600.1 68414.m01595 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 196
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 156 MNSFPSPISQTHASIPPTK**NATPIMTS 242
MN+ P+ ++ +PP K N TPIM S
Sbjct: 1 MNTIPAELTGYFHYLPPDKYNNQTPIMES 29
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 97 PYPLPTGHIRTNHLCP*CL 153
P P PT N LCP CL
Sbjct: 411 PVPPPTSSASDNQLCPICL 429
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 97 PYPLPTGHIRTNHLCP*CL 153
P P PT N LCP CL
Sbjct: 411 PVPPPTSSASDNQLCPICL 429
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 97 PYPLPTGHIRTNHLCP*CL 153
P P PT N LCP CL
Sbjct: 411 PVPPPTSSASDNQLCPICL 429
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 97 PYPLPTGHIRTNHLCP*CL 153
P P PT N LCP CL
Sbjct: 411 PVPPPTSSASDNQLCPICL 429
>At4g12740.1 68417.m02001 adenine-DNA glycosylase-related /
MYH-related similar to MYH (GI:18845094) [Rattus
norvegicus]; similar to adenine-DNA glycosylase
(GI:12656850) [Mus musculus]; contains TIGRFAM profile
TIGR01084: A/G-specific adenine glycosylase (hits below
the trusted cutoff)
Length = 630
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 197 YPTNQIVKCYPHHDKYMTCYMLYHN 271
YPT +++K P HD C + HN
Sbjct: 374 YPT-KVIKAKPRHDFCCVCVLEIHN 397
>At2g14777.1 68415.m01672 hypothetical protein No suitable start
codon could be identified.
Length = 224
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 302 WKSLYRWVRSHYGTAYSKSCTCHDGGSISLFGWWDRSMCL*Y 177
WK +R+V H + + CT H G + F W+ R + + Y
Sbjct: 186 WKRSWRFV--HPPSCVGQ-CTFHHGCRVCFFYWYAREIAIFY 224
>At1g28130.2 68414.m03447 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 466
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +2
Query: 113 LVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFLPNDI 292
+ Y P + ++ +S Y ++ C++ N C P Y + + +FLP D
Sbjct: 165 MAQYIPTLEFYSGGLPLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMAYFEFLPVDD 224
Query: 293 NS 298
S
Sbjct: 225 KS 226
>At1g28130.1 68414.m03446 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 609
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +2
Query: 113 LVTYAPIISAHNAYHEQLSFSYITNTCFYPTNQIVKCYPHHDKYMTCYMLYHNDFLPNDI 292
+ Y P + ++ +S Y ++ C++ N C P Y + + +FLP D
Sbjct: 308 MAQYIPTLEFYSGGLPLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMAYFEFLPVDD 367
Query: 293 NS 298
S
Sbjct: 368 KS 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,135,055
Number of Sequences: 28952
Number of extensions: 176126
Number of successful extensions: 443
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 350523880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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