Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2138
(385 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 138 2e-33
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 135 1e-32
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 133 4e-32
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 7e-31
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 52 2e-07
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 50 5e-07
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 50 7e-07
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 7e-07
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 50 7e-07
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 50 9e-07
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 39 0.001
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 36 0.009
SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37) 34 0.046
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.14
SB_29947| Best HMM Match : Fasciclin (HMM E-Value=2.3e-33) 31 0.24
SB_21584| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.74
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_43695| Best HMM Match : Toxin_1 (HMM E-Value=8.9) 27 5.2
SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33) 27 5.2
SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07) 27 5.2
SB_5049| Best HMM Match : SSF (HMM E-Value=0.26) 27 5.2
SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_11311| Best HMM Match : M-inducer_phosp (HMM E-Value=8.4) 27 6.9
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 26 9.2
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 26 9.2
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 9.3
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 138 bits (333), Expect = 2e-33
Identities = 69/113 (61%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +3
Query: 18 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKY 197
KMREIVH QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKY
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 272
Query: 198 VPQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
VP+ L G + NNWAKGHYT G
Sbjct: 273 VPR---AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 322
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQ+ DN S + EGAEL+D
Sbjct: 274 PRAVLVDLEPGTMDSVR------SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 327
Query: 370 SILNL 384
S+L++
Sbjct: 328 SVLDV 332
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIF 298
SGPF QIF PDNF+F
Sbjct: 291 SGPFGQIFRPDNFVF 305
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 135 bits (327), Expect = 1e-32
Identities = 68/112 (60%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVH QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P IL+ L+PGTMDSVR P GQ+ DN S + EGAEL+D
Sbjct: 61 PRAILVDLEPGTMDSVR------SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
S+L++
Sbjct: 115 SVLDV 119
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIF 298
SGPF QIF PDNF+F
Sbjct: 78 SGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 133 bits (322), Expect = 4e-32
Identities = 67/112 (59%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIV +QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---SVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P ++LI L+PGTMDSVR P GQ+ DN S + EGAEL+D
Sbjct: 61 PRSVLIDLEPGTMDSVR------SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMD 114
Query: 370 SILNL 384
S+L++
Sbjct: 115 SVLDV 119
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 209 PSSSTCNPAPWTLSA--SGPFTQIFPPDNFIF 298
P S + P T+ + SGPF QIF PDNF+F
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 129 bits (312), Expect = 7e-31
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVH QAGQCGNQIGAKFWE+ISDEHGI PTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIFKTIQAAK 319
SGPF QIF PDNF+F+ K
Sbjct: 78 SGPFGQIFRPDNFVFECFAIRK 99
Score = 30.3 bits (65), Expect = 0.56
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTF 264
P IL+ L+PGTMDSVR F
Sbjct: 61 PRAILVDLEPGTMDSVRSGPF 81
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 54.4 bits (125), Expect = 3e-08
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQ--LERINVYYNEASGGK 194
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 51.6 bits (118), Expect = 2e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
Score = 49.6 bits (113), Expect = 9e-07
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 198 VPQ 206
VP+
Sbjct: 495 VPR 497
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 50.0 bits (114), Expect = 7e-07
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 50.0 bits (114), Expect = 7e-07
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 50.0 bits (114), Expect = 7e-07
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 195 YVPQ 206
+VP+
Sbjct: 646 HVPR 649
Score = 49.6 bits (113), Expect = 9e-07
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 198 VPQ 206
VP+
Sbjct: 574 VPR 576
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 198 VPQ 206
VP+
Sbjct: 126 VPR 128
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 49.6 bits (113), Expect = 9e-07
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 198 VPQ 206
VP+
Sbjct: 61 VPR 63
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 198 VPQ 206
VP+
Sbjct: 480 VPR 482
Score = 34.7 bits (76), Expect = 0.026
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 66 IGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKYVPQ 206
+G WE+ EHGI P G D + + N +++E GK+VP+
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 49
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 48.4 bits (110), Expect = 2e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 198 VPQ 206
VP+
Sbjct: 433 VPR 435
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 198 VPQ 206
VP+
Sbjct: 866 VPR 868
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 47.2 bits (107), Expect = 5e-06
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLER----INVYYNEASG 188
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 189 GKYVPQ 206
GK+ Q
Sbjct: 254 GKHADQ 259
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 78 FWEIISDEHGIYPTGAYHG-DSDLQLERINVYYNE 179
FWE+I++EHGI P G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQ+ DN S + EGAEL+D
Sbjct: 6 PRAVLVDLEPGTMDSVR------SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 59
Query: 370 SILNL 384
S+L++
Sbjct: 60 SVLDV 64
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIF 298
SGPF QIF PDNF+F
Sbjct: 23 SGPFGQIFRPDNFVF 37
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +IL+ L+PGTMD+VR P G + DN S A + EGAELID
Sbjct: 17 PRSILVDLEPGTMDAVR------GGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 370 SILNL 384
+I ++
Sbjct: 71 NIFDV 75
>SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37)
Length = 583
Score = 33.9 bits (74), Expect = 0.046
Identities = 17/79 (21%), Positives = 34/79 (43%)
Frame = +3
Query: 18 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKY 197
K R VH+ GN++ E + G++P HG D+++ + ++ +
Sbjct: 454 KKRVEVHLSTSSLGNEMSVIANEGETSTSGVHPR---HGQEDIEMSYVTGSHSPVHRPRQ 510
Query: 198 VPQHHPHPLATRHHGLCPP 254
P+H P+ + +C P
Sbjct: 511 SPKHAPNRATINANNICDP 529
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.14
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 30 IVHIQAGQCGNQIGAKFWEIISDE 101
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_29947| Best HMM Match : Fasciclin (HMM E-Value=2.3e-33)
Length = 725
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 239 WTLSASGPFTQIFPPDNFIFKTIQAAK 319
W L+ SGPFT + P D K++ AK
Sbjct: 64 WPLAGSGPFTALVPTDQGFLKSLSQAK 90
>SB_21584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1750
Score = 29.9 bits (64), Expect = 0.74
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 141 DLQLERINVYYNEASGGKYVPQHHPHPLAT 230
+L+ ++++ YY E++G +P H PLAT
Sbjct: 715 ELRFQQMDGYYKESAGATPIPVMHSSPLAT 744
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 265 HTDLPSGQLHLQDNPSSQATTGPRDTTHEGAE 360
H+ P+ +LHL P + A+ P D +E AE
Sbjct: 259 HSQRPTDKLHLPPRPKTVASFRPEDFANESAE 290
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 197 RAPAPSSSTCNP-APWTLSASGPFTQIFP-PDNFIFKTIQAAKQQ 325
R P S P +P T S++ PF Q FP PD ++ T Q A+Q+
Sbjct: 3094 RRSEPGSPFVEPQSPRTPSSTDPFGQRFPTPDQYLQFTQQQARQR 3138
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 176 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 75
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_43695| Best HMM Match : Toxin_1 (HMM E-Value=8.9)
Length = 180
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 138 SDLQLERINVYYNEASGGKYVPQHHPHP 221
+ L ERI Y N+ K+ P+H+P P
Sbjct: 147 NSLSSERIRAYTNKDGVDKHNPRHNPSP 174
>SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)
Length = 666
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 206 APSSSTCNPAPWTLSASGPFTQIFPPDNFIF 298
AP+ CN P TL ++FP F+F
Sbjct: 477 APAKRLCNKDPLTLRNMTYLARVFPNSKFVF 507
>SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)
Length = 1213
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 233 APWTLSASGPFTQIFPPDNFIFKTIQAAKQQLGQGTLHTRVLNS 364
AP +G T PPD+F + + QGTL T ++N+
Sbjct: 755 APSKEQETGVSTAAQPPDSFSLQDLICGLLAQNQGTLPTTIMNN 798
>SB_5049| Best HMM Match : SSF (HMM E-Value=0.26)
Length = 442
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 227 CKWMRMVLGHVLAAGGFIVVYIDALQLQ 144
CK++ + G ++ G F+V ++ L LQ
Sbjct: 283 CKFVAVAFGAIVTGGAFVVKFVGTLVLQ 310
>SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 204 QHHPHPLATRHH 239
QHH HP AT HH
Sbjct: 178 QHHYHPTATSHH 189
>SB_11311| Best HMM Match : M-inducer_phosp (HMM E-Value=8.4)
Length = 279
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 248 SASGPFTQIFPPDNFIFKTIQAAKQQLGQGTLHTR 352
S GP I PPD+++ ++ A +Q LG T +
Sbjct: 135 SRVGPVGPIRPPDSYVSVSMVATEQGLGPRTFRAK 169
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/78 (20%), Positives = 35/78 (44%)
Frame = +1
Query: 145 CSWSASMYTTMKPPAASTCPSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDNPSSQAT 324
CS + T K + P T+++HL+ + ++ D P +L +++ Q+
Sbjct: 1021 CSMCNAQRTATKSLSVCRFPDTLIVHLKRYRHSNQKIMA-PVDYPLEELDMRE--FMQSA 1077
Query: 325 TGPRDTTHEGAELIDSIL 378
PRD++ E + ++
Sbjct: 1078 NSPRDSSLTNGEYVYDLI 1095
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 26.2 bits (55), Expect = 9.2
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 203 PAPSSSTCNPAPWTLSASGP--FTQIFPPDNFIFKTIQAAKQQLGQGTLHTRVLNSSI 370
PAP T NP T++ G TQI P + + T+ A+ L TL + V+ +++
Sbjct: 73 PAPPKHTSNPPLTTITTGGTRRLTQILPAPSKV--TLPASTVVLPVKTLSSPVVTTAV 128
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 321 NNWAKGHYTRG 353
NNWAKG YT G
Sbjct: 7 NNWAKGFYTEG 17
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 23.8 bits (49), Expect(2) = 9.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 321 NNWAKGHYTRG 353
NN+A+GHYT G
Sbjct: 1012 NNYARGHYTIG 1022
Score = 20.6 bits (41), Expect(2) = 9.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 174 NEASGGKYVPQ 206
+EA+ GKYVP+
Sbjct: 965 SEAAAGKYVPR 975
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,325,904
Number of Sequences: 59808
Number of extensions: 299374
Number of successful extensions: 824
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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