Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2138
(385 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 136 4e-33
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 130 2e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 125 1e-29
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 125 1e-29
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 123 4e-29
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 122 9e-29
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 93 5e-20
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 93 5e-20
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 60 5e-10
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 57 4e-09
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 57 4e-09
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 55 1e-08
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 55 1e-08
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 55 1e-08
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 53 8e-08
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 53 8e-08
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 52 2e-07
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 52 2e-07
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 52 2e-07
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 50 7e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 47 4e-06
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 46 7e-06
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 46 7e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 44 3e-05
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 38 0.003
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 0.49
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 26 7.9
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 26 7.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 26 7.9
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 26 7.9
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 26 7.9
AC006743-1|AAF60503.1| 255|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 136 bits (330), Expect = 4e-33
Identities = 70/112 (62%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVHIQAGQCGNQIGAKFWE+ISDEHGI PTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P L+ L+PGTMDSVR P GQL DN S + EGAEL+D
Sbjct: 61 PRACLVDLEPGTMDSVRAG------PFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
++L++
Sbjct: 115 NVLDV 119
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 209 PSSSTCNPAPWTLSA--SGPFTQIFPPDNFIF 298
P + + P T+ + +GPF Q+F PDNF+F
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVF 92
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 130 bits (315), Expect = 2e-31
Identities = 65/112 (58%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQL DN S + EGAEL+D
Sbjct: 61 PRAVLVDLEPGTMDSVR------SGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
++L++
Sbjct: 115 NVLDV 119
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIF 298
SGPF Q+F PDNF+F
Sbjct: 78 SGPFGQLFRPDNFVF 92
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 125 bits (301), Expect = 1e-29
Identities = 64/112 (57%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVHIQAGQCGNQIG+KFWE+ISDEHGI P+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEG 109
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQL DN S + EGAEL+D
Sbjct: 61 PRAVLVDLEPGTMDSVR------SGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
++L++
Sbjct: 115 NVLDV 119
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 125 bits (301), Expect = 1e-29
Identities = 64/112 (57%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVHIQAGQCGNQIG+KFWE+ISDEHGI P+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEG 109
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQL DN S + EGAEL+D
Sbjct: 61 PRAVLVDLEPGTMDSVR------SGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
++L++
Sbjct: 115 NVLDV 119
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 123 bits (297), Expect = 4e-29
Identities = 61/112 (54%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQL DN S + EGAEL+D
Sbjct: 61 PRAVLVDLEPGTMDSVR------SGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
++L++
Sbjct: 115 NVLDV 119
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIF 298
SGPF Q+F PDNF+F
Sbjct: 78 SGPFGQLFRPDNFVF 92
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 122 bits (294), Expect = 9e-29
Identities = 60/112 (53%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 201 PQHHPHPLATRHHGLCPPL-DXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
P+ L G + NNWAKGHYT G
Sbjct: 61 PR---AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 PSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDN----PSSQATTGPRDTTHEGAELID 369
P +L+ L+PGTMDSVR P GQL DN S + EGAEL+D
Sbjct: 61 PRAVLVDLEPGTMDSVR------SGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 370 SILNL 384
++L++
Sbjct: 115 NVLDV 119
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 254 SGPFTQIFPPDNFIF 298
SGPF Q+F PDNF+F
Sbjct: 78 SGPFGQLFRPDNFVF 92
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.5 bits (222), Expect = 5e-20
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.5 bits (222), Expect = 5e-20
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 60.1 bits (139), Expect = 5e-10
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL---QLERINVYYNEASGGK 194
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 195 YVPQ 206
+VP+
Sbjct: 67 HVPR 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 55.2 bits (127), Expect = 1e-08
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 55.2 bits (127), Expect = 1e-08
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Frame = +3
Query: 15 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQL--ERINVYYNEASG 188
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 189 GKYVPQH-----HPHPLATRHHGLCPPLDXXXXXXXXXXXXXXXXXXXXNNWAKGHYTRG 353
GK+VP+ P P+ G L NN+A+GHYT G
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTL-------FHPEQLLTGKEDAANNYARGHYTIG 116
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 55.2 bits (127), Expect = 1e-08
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 54.8 bits (126), Expect = 2e-08
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLE--RINVYYNEASGGK 194
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 52.8 bits (121), Expect = 8e-08
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 52.8 bits (121), Expect = 8e-08
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 201 PQ 206
P+
Sbjct: 61 PR 62
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGK 194
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 195 YVPQ 206
+VP+
Sbjct: 61 HVPR 64
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 49.6 bits (113), Expect = 7e-07
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDL--QLERINVYYNEASGGKY 197
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 198 VPQ 206
VP+
Sbjct: 61 VPR 63
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 47.2 bits (107), Expect = 4e-06
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 21 MREIVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYV 200
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 201 PQ 206
P+
Sbjct: 60 PR 61
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 46.4 bits (105), Expect = 7e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 30 IVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYVPQ 206
++ + GQCGNQ+ FW+ + DEHGI G + D+ ++ ++Y +A YVP+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPR 64
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 46.4 bits (105), Expect = 7e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 30 IVHIQAGQCGNQIGAKFWEIISDEHGIYPTGAYHGDSDLQLERINVYYNEASGGKYVPQ 206
++ + GQCGNQ+ FW+ + DEHGI G + D+ ++ ++Y +A YVP+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPR 64
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 24 REIVHIQAGQCGNQIGAKFWEIISDEHGIYPTG-AYHGDSDLQLERINVYYNEASGGKYV 200
RE V I GQ G QIG WE+ EHG+ G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 201 PQ 206
P+
Sbjct: 66 PR 67
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 99 EHGIYPTGAYHGDSDL---QLERINVYYNEASGGKYVPQ 206
EHGI P G YH + D + E IN ++ E +GGK+VP+
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPR 42
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 30.3 bits (65), Expect = 0.49
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +3
Query: 123 AYHGDSDLQLERINVYYNEASGGKY---VPQHH-PHPLATRHH 239
A+H D N Y E G +Y VP HH PHP A HH
Sbjct: 52 AHHYDDRYNNTYDNYDYEEDYGNQYANTVPHHHHPHPHAHPHH 94
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 268 TDLPSGQLHLQDNPSSQATTGP 333
T+ PSG LH+ DN S+ P
Sbjct: 2333 TECPSGVLHVDDNSPSRVLNSP 2354
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 268 TDLPSGQLHLQDNPSSQATTGP 333
T+ PSG LH+ DN S+ P
Sbjct: 2333 TECPSGVLHVDDNSPSRVLNSP 2354
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 113 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 12
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 113 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 12
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 26.2 bits (55), Expect = 7.9
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +1
Query: 130 MGTLTCSWSASMYTTMKPPAASTCPSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDNP 309
+ T+ + S S TT KP +T PST T + + T + S
Sbjct: 580 VSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTT--STSTSTSTTTTTTT 637
Query: 310 SSQATTGPRDTTHEGAE 360
S+ ATT P+ TT +E
Sbjct: 638 STTATTTPQPTTTTTSE 654
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 26.2 bits (55), Expect = 7.9
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +1
Query: 130 MGTLTCSWSASMYTTMKPPAASTCPSTILIHLQPGTMDSVRLWTFHTDLPSGQLHLQDNP 309
+ T+ + S S TT KP +T PST T + + T + S
Sbjct: 580 VSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTT--STSTSTSTTTTTTT 637
Query: 310 SSQATTGPRDTTHEGAE 360
S+ ATT P+ TT +E
Sbjct: 638 STTATTTPQPTTTTTSE 654
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 108 IYPTGAYHGDSDLQLERINVYYNEASGGKYVPQHHPHPLATRHHG 242
++ G +HG D + ++ E GG + QH+ + HHG
Sbjct: 36 VHTDGGHHGHVDTHHHEES-HHGEHHGGHHGVQHYESHHESHHHG 79
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 113 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 12
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 113 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 12
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AC006743-1|AAF60503.1| 255|Caenorhabditis elegans Hypothetical
protein Y38C1BA.1 protein.
Length = 255
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 253 LWTF---HTDLPSGQLHLQDNPSSQATTGPRDTTHEGAE 360
+WT+ D+P ++ NP + G RDTT E E
Sbjct: 131 MWTYVDDENDIPVNICDIRRNPKAVVGWGDRDTTAEPVE 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,705,137
Number of Sequences: 27780
Number of extensions: 210486
Number of successful extensions: 838
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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