Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2137
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   3.8  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.6  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.7  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   8.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -2

Query: 128  GDAKDSGDITMAGGKPSA---EDDVTSEELSSSIRSGK-PPLLDQR 3
            G+ KD G    AGG PSA      +T    + S+ +G  P  LD R
Sbjct: 994  GEKKDRGGPMAAGGPPSATAISYGLTMAGAAGSVSNGPVPASLDSR 1039


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 602 PLLTFPPHGHIHFHRH 555
           P+   PPH H H H H
Sbjct: 86  PMPAQPPHHHQHPHHH 101


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 602 PLLTFPPHGHIHFHRH 555
           P+   PPH H H H H
Sbjct: 86  PMPAQPPHHHQHPHHH 101


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 245 IQHHRRSPRCLYQCLPQHRNQKMNRCHQVERNFRRLQA*MA 367
           +  H    R  ++CLPQ      +   Q +R   +L+A +A
Sbjct: 815 VDAHLEELRVRFECLPQANESVADEYAQKKRQLEQLRAGVA 855


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 230 NLSNHIQHHRRSP 268
           NL NH QHH + P
Sbjct: 114 NLLNHHQHHHQHP 126


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 533 YIFG--KFGHACENGYVHEEEMSKVVD*RKWSNRV 631
           Y+ G   +G+ C    +    ++KVV  R+W +R+
Sbjct: 549 YLHGLVSWGYGCHQKQIPYTVLTKVVHFREWIDRI 583


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,462
Number of Sequences: 2352
Number of extensions: 14619
Number of successful extensions: 72
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)