Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2136
         (402 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   3.2  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   5.5  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   7.3  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   9.6  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    22   9.6  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    22   9.6  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    22   9.6  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    22   9.6  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 380 GLTINWDLGIKHFL 339
           GL ++W+ G++HFL
Sbjct: 389 GLWLSWEEGLQHFL 402


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 57  KSSMGNSGHKRLLRLGSSGAG 119
           +  MG+  HKR  RL  S  G
Sbjct: 126 REGMGHDSHKRTHRLSDSDGG 146


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 377 LTINWDLGIKHF 342
           +++NWDL I HF
Sbjct: 759 MSLNWDLLIHHF 770


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 14  DLNCHTRLHPAS*CQ 58
           DLN HT L P   C+
Sbjct: 96  DLNSHTELKPLDVCE 110


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 85  NDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSK 222
           +D Y LG  VL+H         PA+      V+ A  D+  P  +K
Sbjct: 209 SDGYQLGITVLSHVNSSVFMDIPAIINYLDFVNIAAYDQQTPTRNK 254


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 139 GSVYPAVALITPTVSE 186
           G++YPA A + PT  E
Sbjct: 71  GNIYPAGAKLAPTEQE 86


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 265 LALLQRPKLRHHLHKNTLAETS 330
           L+L   P   HHLH+   A+ S
Sbjct: 45  LSLGMSPYTNHHLHQTRTAQES 66


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 265 LALLQRPKLRHHLHKNTLAETS 330
           L+L   P   HHLH+   A+ S
Sbjct: 45  LSLGMSPYTNHHLHQTRTAQES 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,122
Number of Sequences: 2352
Number of extensions: 8433
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)