Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2136
(402 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 81 1e-15
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 81 1e-15
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 81 1e-15
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 81 1e-15
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 81 1e-15
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 81 1e-15
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 81 1e-15
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 79 4e-15
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 79 4e-15
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 79 4e-15
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 79 5e-15
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 77 2e-14
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 77 2e-14
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 68 1e-11
AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens ... 31 1.4
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 31 1.9
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 31 1.9
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 31 1.9
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 31 1.9
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 30 2.5
S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subuni... 30 3.3
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 30 3.3
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 30 3.3
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 30 3.3
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 30 3.3
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 30 3.3
EF417879-1|ABN50332.1| 109|Homo sapiens immunoglobulin heavy ch... 29 7.7
EF417878-1|ABN50331.1| 109|Homo sapiens immunoglobulin heavy ch... 29 7.7
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 81.4 bits (192), Expect = 1e-15
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VDVLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 115
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 79.4 bits (187), Expect = 4e-15
Identities = 51/125 (40%), Positives = 70/125 (56%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 PPVFSKVVTVDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPN 384
VF +V+ V+++DS + +HLA L+RP+L L K T KC + +V N
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSN 143
Query: 385 LQ*LF 399
+ LF
Sbjct: 144 VDELF 148
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 79.4 bits (187), Expect = 4e-15
Identities = 51/125 (40%), Positives = 70/125 (56%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 PPVFSKVVTVDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPN 384
VF +V+ V+++DS + +HLA L+RP+L L K T KC + +V N
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSN 143
Query: 385 LQ*LF 399
+ LF
Sbjct: 144 VDELF 148
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 79.4 bits (187), Expect = 4e-15
Identities = 51/125 (40%), Positives = 70/125 (56%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 PPVFSKVVTVDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPN 384
VF +V+ V+++DS + +HLA L+RP+L L K T KC + +V N
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSN 143
Query: 385 LQ*LF 399
+ LF
Sbjct: 144 VDELF 148
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 79.0 bits (186), Expect = 5e-15
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVTVD 237
++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF +V+ VD
Sbjct: 1 DQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVD 60
Query: 238 VLDSKNPVHLALLQRPKLRHHLHKNTLAETSLIT-KKCFIPKSQFIVNPNLQ*LF 399
VLDS + HL L++RP+L L K L SL KC + +V N+ LF
Sbjct: 61 VLDSGDSAHLTLMKRPELGVTLTK--LHCWSLTQYSKCVFMDADTLVLANIDDLF 113
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 77.0 bits (181), Expect = 2e-14
Identities = 49/116 (42%), Positives = 67/116 (57%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF +V+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPNLQ*LF 399
V+++DS + +HLA L+RP+L L K T KC + +V N+ LF
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSNVDELF 117
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 77.0 bits (181), Expect = 2e-14
Identities = 49/116 (42%), Positives = 67/116 (57%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVT 231
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF +V+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 232 VDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPNLQ*LF 399
V+++DS + +HLA L+RP+L L K T KC + +V N+ LF
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSNVDELF 117
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 68.1 bits (159), Expect = 1e-11
Identities = 45/107 (42%), Positives = 58/107 (54%)
Frame = +1
Query: 79 ATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLPPVFSKVVTVDVLDSKNP 258
ATND Y GALVL SLRR V LITP VS +R L VF +V+ V+++DS +
Sbjct: 3 ATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADY 62
Query: 259 VHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPNLQ*LF 399
+HLA L+RP+L L K T KC + +V N+ LF
Sbjct: 63 IHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSNVDELF 108
>AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ44103 fis, clone TESTI4044084. ).
Length = 161
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 177 GRCDECYGRVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCS 34
G C + G+ +GA R QHQ+ + Q PC H AGCS
Sbjct: 22 GHCPQFQGKKQMSGARAR-AQHQAHSSQESTQCQVSPCPAWHPRAGCS 68
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 363 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 402
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 220 KVVTVDVLDSKNPVHLALLQRPKLRHHLHKNTLAETSLITKKCFIPKSQFIVNPNLQ*LF 399
+V+ V+++DS + +HLA L+RP+L L K T KC + +V N+ LF
Sbjct: 2 EVIEVNLIDSADYIHLAFLKRPELGLTLTK-LHCWTLTHYSKCVFLDADTLVLSNVDELF 60
>S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subunit
protein.
Length = 980
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 84 KRLLRLGSSGAGPFAPPRRLGVPCRST 164
+R+ L +SGAG APPR LGVP +T
Sbjct: 937 RRIQALRASGAG--APPRGLGVPAEAT 961
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 34 PSKRALPRDPSSEVPSKRKNSAPQLPLL 61
>EF417879-1|ABN50332.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 31 ETTPGFIMSNRAWVTLATNDSYGLGALVLAHS 126
+T + R W+ +ATND +G G LV S
Sbjct: 76 DTAVYYCARERGWLEMATNDYWGQGTLVTVSS 107
>EF417878-1|ABN50331.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 31 ETTPGFIMSNRAWVTLATNDSYGLGALVLAHS 126
+T + R W+ +ATND +G G LV S
Sbjct: 76 DTAVYYCARERGWLEMATNDYWGQGTLVTVSS 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,546,030
Number of Sequences: 237096
Number of extensions: 1385572
Number of successful extensions: 4693
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4693
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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