Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2133
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   5.0  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    20   6.6  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query: 242 TGGCLGPS-CCG 210
           +G C GPS CCG
Sbjct: 53  SGQCFGPSICCG 64



 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -1

Query: 301 CNRM*SFHHRSPC 263
           C R   FH R PC
Sbjct: 78  CQREGFFHEREPC 90


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 94  QLVPADQYDSIYRQNDRQDEEYE 162
           QLV     D IYR+    D++Y+
Sbjct: 113 QLVAKYDPDGIYRKQYEIDDDYD 135


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 182 CHPGRSFSPNHSRRGPSSLQCRLLETI 262
           C    +F+PN  +R P     R  E++
Sbjct: 17  CAAQLNFTPNWGKRAPEGESNRCKESV 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,552
Number of Sequences: 336
Number of extensions: 1666
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.4 bits)