Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2133
(358 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated prot... 31 1.4
BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated prot... 31 1.4
AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated prot... 31 1.4
L41919-1|AAD09201.1| 714|Homo sapiens candidate tumor suppresso... 29 3.2
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 29 3.2
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch... 29 3.2
AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein. 29 3.2
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 29 3.2
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein. 29 3.2
AK125302-1|BAC86120.1| 142|Homo sapiens protein ( Homo sapiens ... 29 5.6
DQ524008-1|ABI35520.1| 119|Homo sapiens immunoglobulin heavy ch... 28 7.4
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 28 9.8
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 28 9.8
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 28 9.8
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 28 9.8
>BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 245 CTGGCLGPSCCGWG*SFCRDGSR*TGLCSYSSSWRSFC 132
C G C G SCCG G C G C SS S C
Sbjct: 48 CGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSC 85
>BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 245 CTGGCLGPSCCGWG*SFCRDGSR*TGLCSYSSSWRSFC 132
C G C G SCCG G C G C SS S C
Sbjct: 48 CGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSC 85
>AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated protein
16.1 protein.
Length = 105
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 245 CTGGCLGPSCCGWG*SFCRDGSR*TGLCSYSSSWRSFC 132
C G C G SCCG G C G C SS S C
Sbjct: 48 CGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSC 85
>L41919-1|AAD09201.1| 714|Homo sapiens candidate tumor suppressor
HIC-1 protein.
Length = 714
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 145 GGHSVYIWSRIGQPERAGTPVLQLCYPGP 59
GG++ Y R G+ RA TPV+Q CY P
Sbjct: 147 GGYAPY--GRPGRGLRAATPVIQACYRSP 173
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 251 IVCTGGCLGPSCCGWG*SFCRDGSR*TGLCSYSSSWRSFCL 129
+ C C P CCG S CR S C+ SS + C+
Sbjct: 108 VCCKPVCCVPVCCGAASSCCRQSSCQPACCASSSCQPACCV 148
>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
protein.
Length = 4024
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 8 DPGLVCSRWKTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRD 169
+PGL W+ ++ + P + +D SSF N PYIDR ++ S++
Sbjct: 846 NPGLRPRHWEAMSAIVGYP-LQPSDDSTVSSFLDMNLEPYIDRFEGISEAASKE 898
>AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein.
Length = 1270
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 8 DPGLVCSRWKTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRD 169
+PGL W+ ++ + P + +D SSF N PYIDR ++ S++
Sbjct: 841 NPGLRPRHWEAMSAIVGYP-LQPSDDSTVSSFLDMNLEPYIDRFEGISEAASKE 893
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 251 IVCTGGCLGPSCCGWG*SFCRDGSR*TGLCSYSSSWRSFCL 129
+ C C P CCG S CR S C+ SS + C+
Sbjct: 108 VCCKPVCCVPVCCGAASSCCRQSSCQPACCASSSCQPACCV 148
>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
Length = 4031
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 8 DPGLVCSRWKTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRD 169
+PGL W+ ++ + P + +D SSF N PYIDR ++ S++
Sbjct: 853 NPGLRPRHWEAMSAIVGYP-LQPSDDSTVSSFLDMNLEPYIDRFEGISEAASKE 905
>AK125302-1|BAC86120.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ43312 fis, clone NT2RI2012659. ).
Length = 142
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -1
Query: 124 WSRIG---QPERAGTPVLQLCYPGPGSHNRKSLPPAAN 20
WSR QP G PVL L +P PGS + LPP A+
Sbjct: 106 WSREADEWQPCPVGAPVL-LLHPPPGSAHLLRLPPRAS 142
>DQ524008-1|ABI35520.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 161 SYSSSWRSFCLYMESYWSAGTSWYTCPPALLSWAWF 54
S +S F L + S +A T+ Y C SW WF
Sbjct: 71 SVDTSKNQFSLKLSSVTAADTAVYYCARVNSSWGWF 106
>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
protein.
Length = 1109
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = -2
Query: 168 SLLILFILAVILSIYGVVLVSRNELVHLSSSSAILGLVLIIVRVFHLLQTR 16
SLL+L++ +++ +++ V+++ EL+ + A+ LV I V ++ +
Sbjct: 488 SLLVLYVDSMVKNLHSVLVIKLQELIRNGTKLALEQLVTTIASVADTIEEK 538
>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = -2
Query: 168 SLLILFILAVILSIYGVVLVSRNELVHLSSSSAILGLVLIIVRVFHLLQTR 16
SLL+L++ +++ +++ V+++ EL+ + A+ LV I V ++ +
Sbjct: 484 SLLVLYVDSMVKNLHSVLVIKLQELIRNGTKLALEQLVTTIASVADTIEEK 534
>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = -2
Query: 168 SLLILFILAVILSIYGVVLVSRNELVHLSSSSAILGLVLIIVRVFHLLQTR 16
SLL+L++ +++ +++ V+++ EL+ + A+ LV I V ++ +
Sbjct: 484 SLLVLYVDSMVKNLHSVLVIKLQELIRNGTKLALEQLVTTIASVADTIEEK 534
>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
protein.
Length = 1105
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = -2
Query: 168 SLLILFILAVILSIYGVVLVSRNELVHLSSSSAILGLVLIIVRVFHLLQTR 16
SLL+L++ +++ +++ V+++ EL+ + A+ LV I V ++ +
Sbjct: 484 SLLVLYVDSMVKNLHSVLVIKLQELIRNGTKLALEQLVTTIASVADTIEEK 534
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.133 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,087,983
Number of Sequences: 237096
Number of extensions: 1269084
Number of successful extensions: 2620
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2617
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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