Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2133
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical pr...    29   0.72 
Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical pr...    28   2.2  
Z75537-5|CAA99837.3|  335|Caenorhabditis elegans Hypothetical pr...    27   2.9  
AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    26   6.7  
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    26   6.7  
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    26   6.7  
AF036706-1|AAK39287.1|  196|Caenorhabditis elegans Hypothetical ...    26   6.7  
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    26   8.9  
Z72502-8|CAD44097.1|  374|Caenorhabditis elegans Hypothetical pr...    26   8.9  

>U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical
           protein K09H11.4 protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 7   RPR-PRLQQVEDSYDYENQAQDSRAGGQVYQLVPADQYDSIYRQN--DRQDEEYEQRP 171
           RP  P   +V+D +D E + +  + G    +         I R N  DR+DEE E+RP
Sbjct: 136 RPHLPDPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDEEEEERP 193


>Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical
           protein T14G10.6 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -2

Query: 171 WSLLILFILAVILSIYGVVLVSRNELVHLSSSSAILGLVLI 49
           W LLI+  L  I+   G V   R     L+  S +LGL+LI
Sbjct: 86  WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLI 126


>Z75537-5|CAA99837.3|  335|Caenorhabditis elegans Hypothetical
           protein F18E2.4 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 171 WSLLILFILAVILSIYGVVLVSRNELVHLSSSSAILGL 58
           WS+LI  I+  +L I  + ++ R +L+HL+    I+ L
Sbjct: 38  WSILIFGIVIELLYIPTIYMMFRTKLIHLTCYKIIVCL 75


>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 168 SLLILFILAVILSIYGVVLVSRNELVH 88
           +L+ L+++ V L +YG++   R+EL+H
Sbjct: 161 TLIFLYVVIVPLLLYGLLWNRRSELLH 187


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 168 SLLILFILAVILSIYGVVLVSRNELVH 88
           +L+ L+++ V L +YG++   R+EL+H
Sbjct: 151 TLIFLYVVIVPLLLYGLLWNRRSELLH 177


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 168 SLLILFILAVILSIYGVVLVSRNELVH 88
           +L+ L+++ V L +YG++   R+EL+H
Sbjct: 151 TLIFLYVVIVPLLLYGLLWNRRSELLH 177


>AF036706-1|AAK39287.1|  196|Caenorhabditis elegans Hypothetical
           protein T07A9.1 protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 67  DSRAGGQVYQLVPADQYDSIYRQNDRQDEEYEQR 168
           D  AGG ++Q  P     +I R++  QDEE +Q+
Sbjct: 156 DVTAGGPLFQQRPYPAPGAILRKHKPQDEEDDQQ 189


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 257 FLIVCTGGCLGPSC-CGWG*SFC 192
           F+I CT G  G SC C  G S C
Sbjct: 265 FVIPCTSGTSGNSCSCSTGYSIC 287


>Z72502-8|CAD44097.1|  374|Caenorhabditis elegans Hypothetical
           protein C08B6.11 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 290 VKLPSSFTLL*FLIVCTGGCLGPSCC 213
           + +PS+  LL FL++C    LG  CC
Sbjct: 193 IHIPSNNFLLPFLLLCGFAILGYICC 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.312    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,601,554
Number of Sequences: 27780
Number of extensions: 168355
Number of successful extensions: 415
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)