Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2132
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   1.7  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   6.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.9  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   9.2  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 324 EARNETALRRHLEHQERQEQPQ--PGLHRHRGFQVQDRRE 211
           E + E  L R +E Q+RQEQ Q      R R  Q Q +++
Sbjct: 163 ELQREQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQKQQ 202


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 300 RRHLEHQERQEQPQPGLHRHRG 235
           RR  +HQE+Q QP    H+  G
Sbjct: 92  RRMQQHQEKQRQPPQQQHQQIG 113


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -3

Query: 318 RNETALRRHLEHQERQEQPQPGLHRHRGFQVQDRREGNTQE 196
           RN   L      Q++Q+Q Q   H H         E +T E
Sbjct: 139 RNGIVLHHQAHQQQQQQQQQLHHHHHHHHNAPAGGESSTSE 179


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 288 EHQERQEQPQPGLHRHRGFQVQDRREGNTQE 196
           +HQ++Q+Q QP      G Q Q +     Q+
Sbjct: 302 QHQQQQQQRQPQRQAVAGSQQQQQERMQQQQ 332


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 330 AYEARNETALRRHLEHQERQEQPQPGLHRHRGFQVQDRREGNTQE 196
           A+ +RN    +   + ++RQ+Q Q   H+ R  Q Q +++   Q+
Sbjct: 205 AHSSRNRRGRQGPQQQEQRQQQQQ---HQQREQQQQQQQQQQQQQ 246


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
 Frame = +3

Query: 432 WSVDDESAR--LGAV-----RNPRTYSAATSLNHS-LIASWIPSS 542
           WS   ES R  +G+       +P++ +++TSLNHS  I+S  P S
Sbjct: 492 WSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPS 536


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
 Frame = +3

Query: 432 WSVDDESAR--LGAV-----RNPRTYSAATSLNHS-LIASWIPSS 542
           WS   ES R  +G+       +P++ +++TSLNHS  I+S  P S
Sbjct: 493 WSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPS 537


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 409 SDDIIQKSGPLMMSRPVLGPSGTP 480
           +D+ I+  G  + SR V GP G P
Sbjct: 402 TDEEIRNIGRSLKSRKVPGPDGIP 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,250
Number of Sequences: 2352
Number of extensions: 10141
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)