Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2132
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012745-1|AAH12745.1| 1297|Homo sapiens ribosomal RNA processin...    46   9e-05
BC002621-1|AAH02621.3|  203|Homo sapiens RRP12 protein protein.        46   9e-05
AL355490-8|CAI40776.1| 1197|Homo sapiens KIAA0690 protein.             46   9e-05
AL355490-7|CAI40777.1| 1297|Homo sapiens KIAA0690 protein.             46   9e-05
AB014590-1|BAA31665.1| 1214|Homo sapiens KIAA0690 protein protein.     46   9e-05

>BC012745-1|AAH12745.1| 1297|Homo sapiens ribosomal RNA processing 12
            homolog (S. cerevisiae) protein.
          Length = 1297

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 103  DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKS 11
            DPYAY+PL+R+ LN+RKK     QFKG+VK+
Sbjct: 1249 DPYAYIPLNRSKLNRRKKMKLQGQFKGLVKA 1279


>BC002621-1|AAH02621.3|  203|Homo sapiens RRP12 protein protein.
          Length = 203

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 103 DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKS 11
           DPYAY+PL+R+ LN+RKK     QFKG+VK+
Sbjct: 155 DPYAYIPLNRSKLNRRKKMKLQGQFKGLVKA 185


>AL355490-8|CAI40776.1| 1197|Homo sapiens KIAA0690 protein.
          Length = 1197

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 103  DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKS 11
            DPYAY+PL+R+ LN+RKK     QFKG+VK+
Sbjct: 1149 DPYAYIPLNRSKLNRRKKMKLQGQFKGLVKA 1179


>AL355490-7|CAI40777.1| 1297|Homo sapiens KIAA0690 protein.
          Length = 1297

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 103  DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKS 11
            DPYAY+PL+R+ LN+RKK     QFKG+VK+
Sbjct: 1249 DPYAYIPLNRSKLNRRKKMKLQGQFKGLVKA 1279


>AB014590-1|BAA31665.1| 1214|Homo sapiens KIAA0690 protein protein.
          Length = 1214

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 103  DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKS 11
            DPYAY+PL+R+ LN+RKK     QFKG+VK+
Sbjct: 1166 DPYAYIPLNRSKLNRRKKMKLQGQFKGLVKA 1196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,249,772
Number of Sequences: 237096
Number of extensions: 1444086
Number of successful extensions: 3788
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3781
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)