Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2132
(566 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051753-1|AAK93177.1| 1014|Drosophila melanogaster LD28893p pro... 52 7e-07
AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA... 52 7e-07
BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p pro... 29 4.4
AY118390-1|AAM48419.1| 873|Drosophila melanogaster RE39020p pro... 29 4.4
AJ223300-1|CAA11241.1| 902|Drosophila melanogaster homebox prot... 29 4.4
AE013599-3085|AAF46639.3| 873|Drosophila melanogaster CG10052-P... 29 4.4
AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC... 29 5.8
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA... 29 5.8
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB... 29 5.8
U01088-1|AAA19976.2| 390|Drosophila melanogaster truncated nucl... 28 7.7
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 28 7.7
AE014296-3499|AAN12161.3| 392|Drosophila melanogaster CG18023-P... 28 7.7
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 28 7.7
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 28 7.7
>AY051753-1|AAK93177.1| 1014|Drosophila melanogaster LD28893p protein.
Length = 1014
Score = 51.6 bits (118), Expect = 7e-07
Identities = 19/30 (63%), Positives = 28/30 (93%)
Frame = -2
Query: 103 DPYAYLPLSRTNLNKRKKSVNSKQFKGIVK 14
DPYAY+PL+R NLNKRK+S+NS++FK +++
Sbjct: 966 DPYAYIPLTRNNLNKRKRSMNSRKFKSVLR 995
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 320 PGTKRRYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNL 192
P R+ DD +S++SG++ T S+Y GGKGIHR L
Sbjct: 892 PKRVRKGDDAMSMKSGKT--------TASSRYTAGGKGIHRQL 926
>AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA
protein.
Length = 1384
Score = 51.6 bits (118), Expect = 7e-07
Identities = 19/30 (63%), Positives = 28/30 (93%)
Frame = -2
Query: 103 DPYAYLPLSRTNLNKRKKSVNSKQFKGIVK 14
DPYAY+PL+R NLNKRK+S+NS++FK +++
Sbjct: 1336 DPYAYIPLTRNNLNKRKRSMNSRKFKSVLR 1365
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 320 PGTKRRYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNL 192
P R+ DD +S++SG++ T S+Y GGKGIHR L
Sbjct: 1262 PKRVRKGDDAMSMKSGKT--------TASSRYTAGGKGIHRQL 1296
>BT010118-1|AAQ22587.1| 961|Drosophila melanogaster AT27581p
protein.
Length = 961
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -3
Query: 342 QAFEAYEARNETALRRHLEHQERQEQPQPGLHRHRGFQ 229
Q + ++ + + +++HL Q++Q+ P P H G Q
Sbjct: 108 QQQQQHQQQQQQTIQQHLHQQQQQQSPHPAQHLTYGHQ 145
>AY118390-1|AAM48419.1| 873|Drosophila melanogaster RE39020p
protein.
Length = 873
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 294 HLEHQERQEQPQPGLHRHRGFQVQDRREGN 205
H + Q++Q+Q Q L + +GFQ R GN
Sbjct: 435 HHQQQQQQQQQQQQLQQQQGFQHDFRNSGN 464
>AJ223300-1|CAA11241.1| 902|Drosophila melanogaster homebox protein
DRx protein.
Length = 902
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 294 HLEHQERQEQPQPGLHRHRGFQVQDRREGN 205
H + Q++Q+Q Q L + +GFQ R GN
Sbjct: 466 HHQQQQQQQQQQQQLQQQQGFQHDFRNSGN 495
>AE013599-3085|AAF46639.3| 873|Drosophila melanogaster CG10052-PA
protein.
Length = 873
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 294 HLEHQERQEQPQPGLHRHRGFQVQDRREGN 205
H + Q++Q+Q Q L + +GFQ R GN
Sbjct: 435 HHQQQQQQQQQQQQLQQQQGFQHDFRNSGN 464
>AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC,
isoform C protein.
Length = 958
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 339 AFEAYEARNETALRRHLEHQERQEQPQPGLHRHRGFQ 229
A + + + + +++HL Q++Q+ P P H G Q
Sbjct: 106 AHQQQQQQQQQTIQQHLHQQQQQQSPHPAQHLTYGHQ 142
>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
isoform A protein.
Length = 1521
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 339 AFEAYEARNETALRRHLEHQERQEQPQPGLHRHRGFQ 229
A + + + + +++HL Q++Q+ P P H G Q
Sbjct: 106 AHQQQQQQQQQTIQQHLHQQQQQQSPHPAQHLTYGHQ 142
>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
isoform B protein.
Length = 1531
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 339 AFEAYEARNETALRRHLEHQERQEQPQPGLHRHRGFQ 229
A + + + + +++HL Q++Q+ P P H G Q
Sbjct: 116 AHQQQQQQQQQTIQQHLHQQQQQQSPHPAQHLTYGHQ 152
>U01088-1|AAA19976.2| 390|Drosophila melanogaster truncated nuclear
hormone receptorsuperfamily protein protein.
Length = 390
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 300 RRHLEHQERQEQPQPGLHRHRGFQVQDRREG 208
++HL Q++Q+Q QP L +H Q Q G
Sbjct: 11 QQHLLQQQQQQQHQPQLQQHHQLQQQPHVSG 41
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 281 RSGRSNRSRASTATVGSKYKTGGKGIHRNLDY-CGVCSVYAGR*LRTEESQGRYQEEGQA 105
R GRS + +AS AT +GG RN+D+ S+ + +R+ ++ Y +
Sbjct: 386 REGRSGKPQASRATTNYHSNSGG---DRNVDHRSAPKSMASAGEVRSRDNNRSYDSRNRN 442
Query: 104 RSLRLPT 84
+S+ PT
Sbjct: 443 KSVGAPT 449
>AE014296-3499|AAN12161.3| 392|Drosophila melanogaster CG18023-PB,
isoform B protein.
Length = 392
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 300 RRHLEHQERQEQPQPGLHRHRGFQVQDRREG 208
++HL Q++Q+Q QP L +H Q Q G
Sbjct: 11 QQHLLQQQQQQQHQPQLQQHHQLQQQPHVSG 41
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 300 RRHLEHQERQEQPQPGLHRHRGFQVQDRREG 208
++HL Q++Q+Q QP L +H Q Q G
Sbjct: 481 QQHLLQQQQQQQHQPQLQQHHQLQQQPHVSG 511
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 281 RSGRSNRSRASTATVGSKYKTGGKGIHRNLDY-CGVCSVYAGR*LRTEESQGRYQEEGQA 105
R GRS + +AS AT +GG RN+D+ S+ + +R+ ++ Y +
Sbjct: 386 REGRSGKPQASRATTNYHSNSGG---DRNVDHRSAPKSMASAGEVRSRDNNRSYDSRNRN 442
Query: 104 RSLRLPT 84
+S+ PT
Sbjct: 443 KSVGAPT 449
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,840,303
Number of Sequences: 53049
Number of extensions: 463665
Number of successful extensions: 2364
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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