Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2132
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   1.6  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          23   2.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   6.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.6  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 320 PGTKRRYDDILS 285
           P TKR YDD+LS
Sbjct: 32  PDTKRLYDDLLS 43


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 561 VSQQENHC*ESKKRSEND 508
           ++Q+ N C   KKRSEND
Sbjct: 5   LTQRINSCDLLKKRSEND 22


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 417 HHPKVWSVDDESARLGAVRN 476
           H  K W+ +D  A L A+RN
Sbjct: 406 HGSKSWTQEDMDAALEALRN 425


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/48 (22%), Positives = 27/48 (56%)
 Frame = -3

Query: 339 AFEAYEARNETALRRHLEHQERQEQPQPGLHRHRGFQVQDRREGNTQE 196
           AF+  E + +  ++   +HQ++Q+Q Q  ++  +  Q Q +++   Q+
Sbjct: 408 AFKMTEQQQQ--MQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQ 453



 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 560 SASRKITARNPRSDQRMIE*SRSGVST 480
           +++  ITAR+P+  Q +++ + S  ST
Sbjct: 752 ASTTTITARSPQGSQGLLQCATSNYST 778


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 131 GRYQEEGQARSLRLPTPVQDKSQ*KEKICQQQTVQRDSE 15
           G  QE+ Q +  +  T  Q + Q   K  QQQ  Q+D +
Sbjct: 229 GYIQEQNQQQQQQPLTQQQYQQQIVGKYLQQQAGQQDQQ 267


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 143  EESQGRYQEEGQARSLRLPTPVQDKSQ*KEKICQQQ 36
            ++ Q + Q++ Q    + P P Q + Q +++  QQQ
Sbjct: 1511 QQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 561 VSQQENHC*ESKKRSEND 508
           ++Q+ N C   KKR+END
Sbjct: 5   LTQRINSCDLLKKRNEND 22


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 561 VSQQENHC*ESKKRSEND 508
           ++Q+ N C   KKR+END
Sbjct: 126 LTQRINSCDLLKKRNEND 143


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 344 GKPLKLMKPGTKRRYDDIL 288
           GKP ++ K G  RR+ ++L
Sbjct: 542 GKPSRISKQGLFRRFYNLL 560


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,132
Number of Sequences: 438
Number of extensions: 2891
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)