Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2128
(488 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 1.5
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 23 2.0
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 2.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 2.6
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 3.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 3.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 3.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 3.4
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 6.0
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 6.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 6.0
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 6.0
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 6.0
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 6.0
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.9
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 7.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.0 bits (47), Expect = 1.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 465 EKKRKIPVPPPIDNED*DLCSS 400
EKKR+ +PP ++N + DL +S
Sbjct: 110 EKKREFYIPPEVENVE-DLFTS 130
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 478 ESPTGKKKENPSSPP 434
+SP KK PS PP
Sbjct: 219 DSPNSKKSATPSPPP 233
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -1
Query: 410 FAPPERKYSVWMGWIDPRLPFY--LPTDVDLETGVRRVWPLHCTQEVFLNAPGVAASSSP 237
F + +YS + W P P Y + V L T R + + P A+ S P
Sbjct: 222 FTQQQTQYSQYGSWFLPHQPIYPAVTATVQLSTCTRTTLKNNRASPYPMQRPKSASLSPP 281
Query: 236 GRV 228
V
Sbjct: 282 PHV 284
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 2.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 348 LPSNRCGSRNRSTTSLAPPLYTG 280
LP++RC SR S + + P +G
Sbjct: 79 LPNSRCNSRESSDSLVQPRCPSG 101
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 3.4
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 372 VDRSSPPFLPSNRCGSRNRS--TTSLAPPLYTGSVFKR 265
++ ++PP P R S + T S PPLY V KR
Sbjct: 726 MENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKR 763
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 361 GSIHPIHTEYFLSGGAKILIFIVN 432
GS +PIHT +++G I ++++N
Sbjct: 118 GSRNPIHTSSYMTG---IWVWLIN 138
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 361 GSIHPIHTEYFLSGGAKILIFIVN 432
GS +PIHT +++G I ++++N
Sbjct: 351 GSRNPIHTSSYMTG---IWVWLIN 371
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 361 GSIHPIHTEYFLSGGAKILIFIVN 432
GS +PIHT +++G I ++++N
Sbjct: 351 GSRNPIHTSSYMTG---IWVWLIN 371
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 342 KVEREARIYPPHPYGVLSFWRSKDLN 419
+ +R+ + YP PYG F S +N
Sbjct: 130 QADRDGKNYPAVPYGSGDFHDSCTVN 155
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 342 KVEREARIYPPHPYGVLSFWRSKDLN 419
+ +R+ + YP PYG F S +N
Sbjct: 131 QADRDGKNYPAVPYGSGDFHDSCTVN 156
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 342 KVEREARIYPPHPYGVLSFWRSKDLN 419
+ +R+ + YP PYG F S +N
Sbjct: 131 QADRDGKNYPAVPYGSGDFHDSCTVN 156
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 326 DPHLLEGRKGGEDLSTPSI 382
DP+ G+ G EDLS S+
Sbjct: 145 DPYSPNGKIGREDLSPSSL 163
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 388 YFLSGGAKILIFIVNGGGN 444
Y + AK+LIF+V+ GN
Sbjct: 73 YSFNTFAKLLIFVVSLSGN 91
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.0 bits (42), Expect = 6.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 95 ASAVPGRRAKRAP 133
AS+ PGR KRAP
Sbjct: 34 ASSWPGRPPKRAP 46
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 336 CWKVEREARIYPPHPY 383
C+ + A YP HPY
Sbjct: 42 CYSPPQVAPQYPQHPY 57
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,375
Number of Sequences: 336
Number of extensions: 3133
Number of successful extensions: 24
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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