Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2128
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 73 8e-14
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 73 8e-14
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 73 8e-14
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 73 8e-14
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 73 8e-14
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 73 8e-14
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 73 8e-14
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 73 8e-14
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 73 8e-14
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 73 8e-14
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 73 8e-14
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 58 3e-09
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 31 0.34
Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical pr... 30 1.0
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 30 1.0
AC024206-1|AAF36050.2| 234|Caenorhabditis elegans Hypothetical ... 29 1.4
Z81492-9|CAB04026.2| 805|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 29 2.4
U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 27 9.7
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 27 9.7
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 9.7
AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protei... 27 9.7
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 9.7
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 27 9.7
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 52.0 bits (119), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + Q P TMKIKI APPERKYSVW+G
Sbjct: 307 PGIADRMQK-EIQHLAPSTMKIKIIAPPERKYSVWIG 342
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAP--TMKIKIIAPPERKYSVWIG 342
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 299 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 264 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 299
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 329 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 294 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 329
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 373 GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
GG ILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 482 PGIPDRKKKGKSQFPPPLTMKIKIFAPPERKYSVWMG 372
PGI DR +K + P TMKIKI APPERKYSVW+G
Sbjct: 308 PGIADRMQKEITALAPS-TMKIKIIAPPERKYSVWIG 343
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Frame = -2
Query: 382 YG-W-GG*ILASLSTFQQMWISKQEYDESGPSIVHRKC 275
YG W GG IL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 398 YGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
Frame = -1
Query: 434 PLTMKIKIFAPP---ERKYSVWMG 372
P T+K+++FA P ERKY W+G
Sbjct: 380 PPTIKLRVFAAPTQAERKYGAWIG 403
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -2
Query: 397 KESTPYGW-GG*ILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
+E W GG I+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 332 QERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.34
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 376 WGG*ILASLSTFQQMWISKQEYDESGPSI 290
+GG +LAS S F Q+ +K EY E GPSI
Sbjct: 386 FGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical
protein F56H6.7 protein.
Length = 797
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = -1
Query: 449 SQFPPPLTMKIKIFAPPERKYSVWMGWIDPRLPFYLPTDVDLETGVRRVWPLHCTQEVFL 270
++F PP+T+ + ++P + +++ +LPT V T +W +Q++ L
Sbjct: 257 NKFAPPITLSVGTYSPWNSQNTLFHK--SAFHTMFLPTTVSFRT--TDIWRSFISQKI-L 311
Query: 269 NAPGVAASSSPGRVAQFR 216
+ G+ S P QFR
Sbjct: 312 HLSGLTVSFVPANAVQFR 329
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 449 SQFPPPLTMKIKIFAPPERKYSVWMGWIDPRLPFYLPTDVDLETGVRRVWPLHCTQEVFL 270
++F PP+T+ + ++P + +++ L +LPT V T +W +Q++ L
Sbjct: 249 NKFAPPITLSVGTYSPWNSQNTLFHKSAFHTL--FLPTTVSFRT--TDIWRSFVSQKI-L 303
Query: 269 NAPGVAASSSPGRVAQFR 216
+ G+ S P QFR
Sbjct: 304 HLSGLTVSFVPTNAVQFR 321
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 449 SQFPPPLTMKIKIFAPPERKYSVWMGWIDPRLPFYLPTDVDLETGVRRVWPLHCTQEVFL 270
++F PP+T+ + ++P + +++ L +LPT V T +W +Q++ L
Sbjct: 237 NKFAPPITLSVGTYSPWNSQNTMFHKSAFHTL--FLPTTVSFRT--TDIWRSFISQKI-L 291
Query: 269 NAPGVAASSSPGRVAQFR 216
+ G+ S P QFR
Sbjct: 292 HLSGLTVSFVPTNAVQFR 309
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 449 SQFPPPLTMKIKIFAPPERKYSVWMGWIDPRLPFYLPTDVDLETGVRRVWPLHCTQEVFL 270
++F PP+T+ + ++P + +++ L +LPT V T +W +Q++ L
Sbjct: 254 NKFAPPITLSVGTYSPWNSQNTMFHKSAFHTL--FLPTTVSFRT--TDIWRSFISQKI-L 308
Query: 269 NAPGVAASSSPGRVAQFR 216
+ G+ S P QFR
Sbjct: 309 HLSGLTVSFVPTNAVQFR 326
>AC024206-1|AAF36050.2| 234|Caenorhabditis elegans Hypothetical
protein Y74C9A.3 protein.
Length = 234
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -1
Query: 419 IKIFAPPERKYS-VWMGWIDPRL 354
++ FAPPER+Y +W+ W+ L
Sbjct: 120 LQTFAPPERRYDLIWIQWVSGHL 142
>Z81492-9|CAB04026.2| 805|Caenorhabditis elegans Hypothetical
protein E03H4.4 protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = -1
Query: 449 SQFPPPLTMKIKIFAPPERKYSVWMGWIDPRLPFYLPTDVDLETGVRRVWPLHCTQEVFL 270
++F PP+T+ + ++P + +++ +LPT V T +W +Q++ L
Sbjct: 261 NKFAPPITLSVGTYSPWNSQNTLFHK--SAFHTMFLPTTVSFRT--TDIWRSFISQKI-L 315
Query: 269 NAPGVAASSSPGRVAQFR 216
+ G+ S P QFR
Sbjct: 316 HLSGLTVSFVPTNAIQFR 333
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -2
Query: 373 GG*ILASL--STFQQMWISKQEYDESG 299
GG +LA+L Q W+SK+EY+E G
Sbjct: 357 GGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical
protein F02C9.2 protein.
Length = 806
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = -1
Query: 449 SQFPPPLTMKIKIFAPPERKYSVWMGWIDPRLPFYLPTDVDLETGVRRVWPLHCTQEVFL 270
++F PP+T+ + ++P + +++ L +LPT V T +W +Q++ L
Sbjct: 260 NKFAPPITLSVGTYSPWNSQNTMFHKSAFHTL--FLPTTVSFRT--TDIWRSFISQKI-L 314
Query: 269 NAPGVAASSSPGRVAQFR 216
+ G+ S P FR
Sbjct: 315 HLSGLTVSFVPTNAVHFR 332
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 150 GRSGAPGARFARRPGTALAKG 88
G GAPG R RPGTA + G
Sbjct: 198 GAPGAPGTRSVGRPGTAGSPG 218
>Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical
protein F55A11.5 protein.
Length = 391
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 404 PPERKYSVWMGWIDPRLPFYL 342
P ER VW W +PR FY+
Sbjct: 301 PVERGDGVWRSWKEPRRHFYV 321
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 358 ASLSTFQQMWISKQEYDESGPSIVHRKCF*THRGSLPPAAR 236
A +S F + K++ DE GPS RK S PAA+
Sbjct: 225 AKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 434 PLTMKIKIFAPPERKYSV-WMGWIDPRLPFYLPTDVDLETGVRRV 303
P++ I++ + + V W + DPRL Y T V+++ RRV
Sbjct: 237 PISNNIQLLYRTDSELRVSWQPFTDPRLQHYEVTAVEVDDDSRRV 281
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 434 PLTMKIKIFAPPERKYSV-WMGWIDPRLPFYLPTDVDLETGVRRV 303
P++ I++ + + V W + DPRL Y T V+++ RRV
Sbjct: 237 PISNNIQLLYRTDSELRVSWQPFTDPRLQHYEVTAVEVDDDSRRV 281
>AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protein
805, isoform d protein.
Length = 908
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 434 PLTMKIKIFAPPERKYSV-WMGWIDPRLPFYLPTDVDLETGVRRV 303
P++ I++ + + V W + DPRL Y T V+++ RRV
Sbjct: 237 PISNNIQLLYRTDSELRVSWQPFTDPRLQHYEVTAVEVDDDSRRV 281
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 434 PLTMKIKIFAPPERKYSV-WMGWIDPRLPFYLPTDVDLETGVRRV 303
P++ I++ + + V W + DPRL Y T V+++ RRV
Sbjct: 237 PISNNIQLLYRTDSELRVSWQPFTDPRLQHYEVTAVEVDDDSRRV 281
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 434 PLTMKIKIFAPPERKYSV-WMGWIDPRLPFYLPTDVDLETGVRRV 303
P++ I++ + + V W + DPRL Y T V+++ RRV
Sbjct: 237 PISNNIQLLYRTDSELRVSWQPFTDPRLQHYEVTAVEVDDDSRRV 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,857,735
Number of Sequences: 27780
Number of extensions: 299380
Number of successful extensions: 698
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -