Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2126
         (451 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CFC34 Cluster: hypothetical protein TTHERM_0053...    32   5.0  
UniRef50_A6DAZ9 Cluster: Putative uncharacterized protein; n=1; ...    32   5.0  
UniRef50_Q4P9I3 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  
UniRef50_UPI00006CE629 Cluster: hypothetical protein TTHERM_0070...    31   8.8  
UniRef50_Q8IAP1 Cluster: Putative uncharacterized protein MAL8P1...    31   8.8  

>UniRef50_UPI00006CFC34 Cluster: hypothetical protein
           TTHERM_00530570; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00530570 - Tetrahymena
           thermophila SB210
          Length = 336

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 217 LNKHGTVNSRHILHYNVTYNLLLIQIKANQS*--NIRLVYKNIDYYTMALYYLVCISKYL 390
           +N +  V S H+        LL++ I  N S   +I L  KN  +    L YL+C++K  
Sbjct: 157 INDYQNVQSLHLQKSQTLITLLILIILQNYSHQLDINLFVKNYKF-AYQLAYLICLTKKK 215

Query: 391 QLCV 402
           Q C+
Sbjct: 216 QFCI 219


>UniRef50_A6DAZ9 Cluster: Putative uncharacterized protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Putative
           uncharacterized protein - Caminibacter mediatlanticus
           TB-2
          Length = 342

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 24/93 (25%), Positives = 47/93 (50%)
 Frame = +1

Query: 160 IKI*IHLYKKVYLSFQNADLNKHGTVNSRHILHYNVTYNLLLIQIKANQS*NIRLVYKNI 339
           + I + + K+ +  F  + +N   ++NS ++L+ N+ YN+ +  I  +   +I+    NI
Sbjct: 53  VNICVIINKQKFYKFLPSIIN---SLNS-YLLYKNIDYNISVYDINTSLE-SIKEKCSNI 107

Query: 340 DYYTMALYYLVCISKYLQLCVQITFFQKKTPNI 438
             YT+   Y+  +S+Y      I  F K+  NI
Sbjct: 108 FVYTLNKDYIYSLSEYNNTNFYIPIFNKEDLNI 140


>UniRef50_Q4P9I3 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 2188

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 443  SQMFGVFFWKNVIWTHSCKYFEIHT 369
            S +  VFF+KN+IWT    +++IH+
Sbjct: 1570 SDLHKVFFYKNIIWTSILFFYQIHS 1594


>UniRef50_UPI00006CE629 Cluster: hypothetical protein
           TTHERM_00706410; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00706410 - Tetrahymena
           thermophila SB210
          Length = 318

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +1

Query: 235 VNSRHILHYNVTYNLLLIQIKANQS*NIRLVYKNIDYYTMALYYLVCISKYL 390
           +N    L + +T NL++  IK +QS  I  +Y N  Y +  ++YL+ I+ +L
Sbjct: 179 INLLVTLIFLITANLVIFNIKYSQSNAI--IYLNAIYISQTIFYLIIIALFL 228


>UniRef50_Q8IAP1 Cluster: Putative uncharacterized protein MAL8P1.139;
            n=3; root|Rep: Putative uncharacterized protein
            MAL8P1.139 - Plasmodium falciparum (isolate 3D7)
          Length = 5910

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 190  VYLSFQNADLNKHGTVNSRHILHYNVTYNLLLIQIKAN 303
            +Y    N+D+N +  VN+ H+L+ NVT N+   Q+ +N
Sbjct: 996  IYEYHMNSDINSNH-VNANHLLNKNVTQNIQSTQLSSN 1032


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,513,965
Number of Sequences: 1657284
Number of extensions: 8029105
Number of successful extensions: 17432
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17426
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)