Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2126
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 376 YTPNNIVPLYNSRCFCKLNE 317
           YTP++ + LYN+      NE
Sbjct: 38  YTPSSTIDLYNTSSVSNFNE 57


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 376 YTPNNIVPLYNSRCFCKLNE 317
           YTP++ + LYN+      NE
Sbjct: 38  YTPSSTIDLYNTSSVSNFNE 57


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 132 IWYRL*NVFYKNLNPFVQKGLFV 200
           IWY L     KN++  +QK LF+
Sbjct: 296 IWYWLDRESAKNVDQRIQKALFL 318


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 377 FQNIYNCASKLHFSKKKHQTSDYL 448
           FQ  ++C   + F +K     DY+
Sbjct: 419 FQQFFHCYCPIKFGRKADPNGDYI 442


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 132 IWYRL*NVFYKNLNPFVQKGLFV 200
           IWY L     KN++  +QK LF+
Sbjct: 296 IWYWLDRESAKNVDQRIQKALFL 318


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 193 YLSFQNADLNKHGTVNSRHILHYNVTYNLLL 285
           Y S  + D N    V S  + H N+++N L+
Sbjct: 173 YNSISSLDFNIFDQVGSLGMFHVNMSHNKLI 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 359  YIIWCVFQNIYNCASKLHFSKKKH 430
            + +W  ++ ++NCA  LH+   K+
Sbjct: 1296 HCLWGKYE-VFNCAPGLHWDNNKN 1318



 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 392  NCASKLHFSKKKH 430
            NCA  LH++ ++H
Sbjct: 1233 NCAPGLHYNPEEH 1245



 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 135  WYRL*NVFYKNLNPFVQKGLFVL 203
            W    N FY+ +  +  KG+ VL
Sbjct: 1875 WADFDNKFYEKVTAYKSKGIKVL 1897


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,460
Number of Sequences: 336
Number of extensions: 2533
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)