Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2126
         (451 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0721 - 23861426-23861929,23862013-23862219,23862598-238628...    29   1.3  
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805...    28   4.0  
01_06_1491 - 37739027-37740153,37740318-37741289,37741641-37741845     27   9.2  

>06_03_0721 -
           23861426-23861929,23862013-23862219,23862598-23862852,
           23862858-23863212,23863533-23863834,23864006-23864281,
           23864854-23865167,23865411-23865683,23865831-23866415,
           23866806-23867132,23867270-23867337,23868670-23868746
          Length = 1180

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +1

Query: 187 KVYLSFQNADLNKHGTVNSRHILHYNVTYNL--LLIQIKANQS*NIRLVYKNIDYYTMAL 360
           ++Y   + A+  +H T ++ H+L+  + Y L   L   +A      R + K  D+    L
Sbjct: 749 RLYFKHKTAETKEHET-SADHVLNMTIRYELHSRLENDQAIDKTAQRQLEKEKDHLRKVL 807

Query: 361 YYLVCISKYL 390
           + +VCI K+L
Sbjct: 808 FRIVCIVKFL 817


>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
            8057595-8058314,8058404-8058603,8058988-8059172,
            8059287-8059354,8059432-8060246,8060502-8060599,
            8060702-8060887,8061358-8061538,8061651-8061812,
            8061894-8061937,8062059-8062115,8062409-8062505,
            8062614-8062786,8062868-8063081,8063270-8063395,
            8064072-8064188,8064459-8064566,8064729-8064898,
            8065049-8065127,8065211-8065285,8065845-8065942,
            8066030-8066137,8066238-8066295,8066527-8066631,
            8067461-8069516,8069804-8070697,8070896-8071852,
            8072022-8072075,8072157-8072222,8072294-8073472,
            8073868-8075598,8075764-8075829,8076763-8077788,
            8077893-8078041
          Length = 4264

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 347  IQWHYIIWCVFQNIYNCASKLHFSKKKHQTSDYL 448
            IQWHYII      I N + KL+   K +++S  L
Sbjct: 1150 IQWHYIIIDEGHRIKNASCKLNADLKHYRSSHRL 1183


>01_06_1491 - 37739027-37740153,37740318-37741289,37741641-37741845
          Length = 767

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 190 VYLSFQNADLNKHGTVNSRHILHYNVTYNLLL 285
           VY    N  L+KH   +++H+L +N  Y + L
Sbjct: 526 VYEYMPNGSLDKHLFGSNQHVLSWNTRYKIAL 557


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,330,600
Number of Sequences: 37544
Number of extensions: 192257
Number of successful extensions: 298
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)