Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2126
         (451 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-P...    31   0.94 
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    30   1.7  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    30   1.7  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    30   1.7  

>AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-PA
            protein.
          Length = 3687

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = +1

Query: 187  KVYLSFQNADLNKHGTVNSRHILHYNVT--YNLLLIQIKANQS*NIRLVYKNIDYYTMAL 360
            +VYL F++  L +HG    +  L+ N    Y+ L  ++  +QS +  ++ +    YT++L
Sbjct: 3426 EVYLKFRSKGLEQHGGFQLQVALNSNRERHYDGLQGRVHLSQSADCNIIIRAPPNYTLSL 3485

Query: 361  YY 366
            YY
Sbjct: 3486 YY 3487


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 286 IQIKANQS*NIRLVYKNIDYYTMALYYLVCISKYLQ 393
           + ++ N+  NI++ Y   + Y + LYYL+ +SK ++
Sbjct: 163 LALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSME 198


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 286 IQIKANQS*NIRLVYKNIDYYTMALYYLVCISKYLQ 393
           + ++ N+  NI++ Y   + Y + LYYL+ +SK ++
Sbjct: 163 LALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSME 198


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 286 IQIKANQS*NIRLVYKNIDYYTMALYYLVCISKYLQ 393
           + ++ N+  NI++ Y   + Y + LYYL+ +SK ++
Sbjct: 163 LALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSME 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,352,246
Number of Sequences: 53049
Number of extensions: 365966
Number of successful extensions: 702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)