Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2125
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 307 YPGDQKDDWICDCRPSEPIS 366
           Y  DQ++ W   CRP E ++
Sbjct: 578 YGLDQQNQWCKPCRPREQLT 597


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 307 YPGDQKDDWICDCRPSEPIS 366
           Y  DQ++ W   CRP E ++
Sbjct: 470 YGLDQQNQWCKPCRPREQLT 489


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 197 ELFCAIDVTNNAHVRNIIFK*HILNSIT 114
           + F ++   +N  V+N  +K HI+ SIT
Sbjct: 555 QAFSSLKELSNHMVKNSHYKEHIMRSIT 582


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 407  PCEVGQYLFLPQN 445
            PCE GQY+  P N
Sbjct: 1102 PCEPGQYVPDPHN 1114


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +1

Query: 1   CKYNPTT*FLFLDGHYSYC*AFLLYNKTNRYFKTRLLTVIEFKMCYLNIIFLTC 162
           C Y+    F+    H  +C AF+       +F   LL ++      L+++FL C
Sbjct: 165 CIYHFFCAFIIFTMHLLFCCAFI-------FFNMHLLFLLCLDYFTLHLLFLPC 211


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 286 CPDNELFYPGDQKDDW 333
           CP N +F P     DW
Sbjct: 947 CPSNLVFNPDQNVCDW 962


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 406 SL*KSWPAFVCSWVI 362
           +L K WP FV  W +
Sbjct: 104 NLAKRWPKFVKDWCV 118


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 406 SL*KSWPAFVCSWVI 362
           +L K WP FV  W +
Sbjct: 104 NLAKRWPKFVKDWCV 118


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 380 KCWPAFLQGPC 412
           +CW  F+ G C
Sbjct: 533 RCWEVFMDGIC 543


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,304
Number of Sequences: 336
Number of extensions: 3394
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)