Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2125
         (534 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025825-1|ABF85725.1|  203|Drosophila melanogaster IP06524p pro...    64   2e-10
AE014297-1077|AAF54483.1|  203|Drosophila melanogaster CG12811-P...    64   2e-10
AY051448-1|AAK92872.1|  503|Drosophila melanogaster GH11627p pro...    32   0.57 
AE014296-2477|AAN11787.1|  503|Drosophila melanogaster CG16959-P...    32   0.57 
AE014296-2476|AAF49662.1|  503|Drosophila melanogaster CG16959-P...    32   0.57 
AY069549-1|AAL39694.1|  434|Drosophila melanogaster LD27553p pro...    29   5.3  
AF017096-1|AAC39085.1|  347|Drosophila melanogaster protein ( Dr...    29   5.3  
AE014297-671|AAF54165.2|  434|Drosophila melanogaster CG2678-PA ...    29   5.3  
AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p pro...    28   7.0  
AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-P...    28   7.0  

>BT025825-1|ABF85725.1|  203|Drosophila melanogaster IP06524p
           protein.
          Length = 203

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +2

Query: 359 LYHP*TDKCWPAFLQGPCEVGQYLFLPQNSVIPVCEQNPCNTD 487
           LY+P TD C+PA+ QGPCE GQ L L +  +IP C +NPCN D
Sbjct: 77  LYYPETDGCYPAYRQGPCEAGQILVLYKEEIIPKCVRNPCNRD 119



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +1

Query: 139 LNIIFLTCALLVTSIAQNSSKDAIGFPEMEENPDLRNKENRQPVFIPARCPDNELFYPGD 318
           +N   L  A L+  I + +        + + +    N   R+P++ PARCP ++L YPGD
Sbjct: 2   INPQLLLIAALIAFIGKVAHAQIAFVEDQDIDKKKANLAGRKPLYSPARCPKHQLLYPGD 61

Query: 319 Q--KDDWICDCRPS 354
           Q  ++DW+CDC P+
Sbjct: 62  QQKQNDWVCDCAPA 75


>AE014297-1077|AAF54483.1|  203|Drosophila melanogaster CG12811-PA
           protein.
          Length = 203

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +2

Query: 359 LYHP*TDKCWPAFLQGPCEVGQYLFLPQNSVIPVCEQNPCNTD 487
           LY+P TD C+PA+ QGPCE GQ L L +  +IP C +NPCN D
Sbjct: 77  LYYPETDGCYPAYRQGPCEAGQILVLYKEEIIPKCVRNPCNRD 119



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +1

Query: 139 LNIIFLTCALLVTSIAQNSSKDAIGFPEMEENPDLRNKENRQPVFIPARCPDNELFYPGD 318
           +N   L  A L+  I + +        + + +    N   R+P++ PARCP ++L YPGD
Sbjct: 2   INPQLLLIAALIAFIGKVAHAQIAFVEDQDIDKKKANLAGRKPLYSPARCPKHQLLYPGD 61

Query: 319 Q--KDDWICDCRPS 354
           Q  ++DW+CDC P+
Sbjct: 62  QQKQNDWVCDCAPA 75


>AY051448-1|AAK92872.1|  503|Drosophila melanogaster GH11627p
           protein.
          Length = 503

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 341 IADHPNLYHP*TDKCWPAFLQGPCEVGQYLFLP 439
           + D  + Y+P  + C+  + +GPC    ++FLP
Sbjct: 203 VGDLASFYYPAEESCYEHYTKGPCSTPGHIFLP 235


>AE014296-2477|AAN11787.1|  503|Drosophila melanogaster CG16959-PB,
           isoform B protein.
          Length = 503

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 341 IADHPNLYHP*TDKCWPAFLQGPCEVGQYLFLP 439
           + D  + Y+P  + C+  + +GPC    ++FLP
Sbjct: 203 VGDLASFYYPAEESCYEHYTKGPCSTPGHIFLP 235


>AE014296-2476|AAF49662.1|  503|Drosophila melanogaster CG16959-PA,
           isoform A protein.
          Length = 503

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 341 IADHPNLYHP*TDKCWPAFLQGPCEVGQYLFLP 439
           + D  + Y+P  + C+  + +GPC    ++FLP
Sbjct: 203 VGDLASFYYPAEESCYEHYTKGPCSTPGHIFLP 235


>AY069549-1|AAL39694.1|  434|Drosophila melanogaster LD27553p
           protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -1

Query: 471 FCSQTG----ITEFCGRNRYCPTSHGPCRKAGQHLSVH 370
           FCSQT     IT+ C R  YCP ++       +HL  H
Sbjct: 206 FCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNH 243


>AF017096-1|AAC39085.1|  347|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 347

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -1

Query: 471 FCSQTG----ITEFCGRNRYCPTSHGPCRKAGQHLSVH 370
           FCSQT     IT+ C R  YCP ++       +HL  H
Sbjct: 207 FCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNH 244


>AE014297-671|AAF54165.2|  434|Drosophila melanogaster CG2678-PA
           protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -1

Query: 471 FCSQTG----ITEFCGRNRYCPTSHGPCRKAGQHLSVH 370
           FCSQT     IT+ C R  YCP ++       +HL  H
Sbjct: 206 FCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNH 243


>AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p
           protein.
          Length = 598

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 197 ELFCAIDVTNNAHVRNIIFK*HILNSITVN--KRVLKYLFVLLYNK 66
           E + A+D   N  VRN + K  I+  +T N  K   KY+ VL Y K
Sbjct: 246 EQYSALDQIKNELVRNSVNKIKIIEGLTRNYEKLKAKYVEVLRYKK 291


>AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-PA
           protein.
          Length = 598

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 197 ELFCAIDVTNNAHVRNIIFK*HILNSITVN--KRVLKYLFVLLYNK 66
           E + A+D   N  VRN + K  I+  +T N  K   KY+ VL Y K
Sbjct: 246 EQYSALDQIKNELVRNSVNKIKIIEGLTRNYEKLKAKYVEVLRYKK 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,631,383
Number of Sequences: 53049
Number of extensions: 566378
Number of successful extensions: 1180
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)