Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2120
         (544 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16V04 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE...    33   3.2  
UniRef50_Q57Y62 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_Q5C277 Cluster: SJCHGC09185 protein; n=1; Schistosoma j...    32   7.4  
UniRef50_Q6HXP7 Cluster: Putative uncharacterized protein; n=7; ...    32   9.8  

>UniRef50_Q16V04 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 674

 Score = 33.9 bits (74), Expect = 2.4
 Identities = 25/98 (25%), Positives = 45/98 (45%)
 Frame = +3

Query: 225 RSHGLRPSICSLTMSAVCCSKLRISSMMIVICLKTFRALQRISKSITLQVSTHHHRQN*N 404
           R+H L+P       + VCC + R++  + +  L   R L + S    +QVS+HH +    
Sbjct: 31  RAHQLKPEE-GFNFAHVCCQQQRLA--ITIDMLSPSRTLPQSSSQ--MQVSSHHPQSQQQ 85

Query: 405 QIPPNSLTIFCNN*TVNANKRIFFSTGYSKKFNLPLDL 518
           Q P +  +    +  +    R   +T  SK+  +P D+
Sbjct: 86  QRPASRRSASSGSDLLQTKLRKLLNTADSKETIIPSDM 123


>UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE1;
           n=17; Eukaryota|Rep: Putative glycoprotein endopeptidase
           KAE1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 386

 Score = 33.5 bits (73), Expect = 3.2
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +1

Query: 76  HNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLL 177
           +NI+ LAK AP ++ LV L  T   +D++ SG+L
Sbjct: 210 YNIEQLAKKAPHKENLVELPYTVKGMDLSMSGIL 243


>UniRef50_Q57Y62 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma brucei|Rep: Putative uncharacterized protein
            - Trypanosoma brucei
          Length = 3030

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 21   DHDGFLVSNRLHTSVCLHAQ-YKNACQNGALTGQVSPSSQNTNI 149
            DH+    S R   S+CLHA+  K A  + A+  Q  PSS N  +
Sbjct: 1743 DHECDAYSGRGRFSICLHAEGIKPASSSNAVAAQEKPSSSNLGV 1786


>UniRef50_Q5C277 Cluster: SJCHGC09185 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09185 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 541

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 212 SASXKESWAAAIDLLTNDECRLLLK-VEDFFNDDCDLLKNFPSAATNIEINNTTSFYPPS 388
           S+S   S AAA+ + T+  C+ LLK  ++       +L N  S+ TN  IN   S   PS
Sbjct: 315 SSSSSSSSAAAVAVATSSTCQSLLKSTQNTITTSTSMLSN-TSSETNSRINMNPSEKSPS 373

Query: 389 PPELK 403
              LK
Sbjct: 374 QMALK 378


>UniRef50_Q6HXP7 Cluster: Putative uncharacterized protein; n=7;
           Bacillus cereus group|Rep: Putative uncharacterized
           protein - Bacillus anthracis
          Length = 379

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 251 LLTNDECRLLLKVEDFFNDDCDLLKNFPSAATNI 352
           L  NDE R+L   E F  D C L K++P+A  N+
Sbjct: 50  LKDNDEYRVLKWEEQFKGDTCILFKDYPTAIVNM 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,475,250
Number of Sequences: 1657284
Number of extensions: 10218177
Number of successful extensions: 24711
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24694
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)