Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2118
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   0.81 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.81 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.6  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -3

Query: 165 PPSVCQHHQKLFRYPPSDRTRKSSFSQYIIIRPK 64
           PP   QH   LF Y    + ++ + ++   +RPK
Sbjct: 223 PPQWYQHQPLLFTYTDDGKNQQRTGTELTKMRPK 256


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 218 VIIQQ*LFFFTIVR--FHFSHLPFVSIIKNYFDI 123
           VI    LF F +V+    F  + FVSII+N F I
Sbjct: 158 VIANVLLFIFIVVKSGVAFQTIEFVSIIRNRFVI 191


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 14  FTQFYRYYSKTKPRKK 61
           F Q Y Y++   PRK+
Sbjct: 112 FPQVYSYFAGVNPRKQ 127


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 286 ASRSNS*VKLNYSTTE 333
           ASRS    +LNY+TTE
Sbjct: 631 ASRSLRGPELNYTTTE 646


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  LYIVKMSFFGFGQTADIEIVFDDAD 152
           LY+V + F  +  +  I++ +DD +
Sbjct: 177 LYVVLLHFLTYNLSLGIKLRYDDVN 201


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  LYIVKMSFFGFGQTADIEIVFDDAD 152
           LY+V + F  +  +  I++ +DD +
Sbjct: 177 LYVVLLHFLTYNLSLGIKLRYDDVN 201


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 252 TSHSLSRRPFHRHNTT 205
           T H + RR   RH TT
Sbjct: 270 TRHLIQRRTHTRHTTT 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,297
Number of Sequences: 336
Number of extensions: 2692
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)