Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2117
         (491 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   2.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.5  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    22   9.9  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 225 FRRSTELNVFFFSILIIQRCLDTLAI-QRTQKG 130
           +RRS  L++FF + L I + LD  +I  RT  G
Sbjct: 495 YRRSLTLSLFFKAYLAIAQSLDKQSIPHRTPVG 527


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -2

Query: 190 FNLNYSALLRHISNTEDTERNDLFKGRFEEAQPIMSSIFPN 68
           F  +YS  ++ +  T     + LF   +++ Q +   I+PN
Sbjct: 638 FTFHYSKDVKPLLQTIQQSDHKLFDFEYDQHQRLSKIIYPN 678


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 181 NYSALLRHISNTEDT 137
           NY+ L+R +SN  DT
Sbjct: 46  NYNRLIRPVSNNTDT 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,745
Number of Sequences: 2352
Number of extensions: 8234
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)