Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2116
         (529 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.              184   1e-46
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (...   184   1e-46
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.        184   1e-46
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly...   175   6e-44
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr...   175   6e-44
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr...   175   6e-44
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha...   175   6e-44
AF492460-1|AAN64030.1| 1322|Homo sapiens WD repeat 17 protein.         29   7.6  

>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
          Length = 1685

 Score =  184 bits (449), Expect = 1e-46
 Identities = 92/112 (82%), Positives = 101/112 (90%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE A+VVIIDM DP+N
Sbjct: 11  MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN 70

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISADSAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTMT+
Sbjct: 71  PIRRPISADSAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMTD 116


>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
           protein.
          Length = 1675

 Score =  184 bits (449), Expect = 1e-46
 Identities = 92/112 (82%), Positives = 101/112 (90%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE A+VVIIDM DP+N
Sbjct: 1   MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN 60

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISADSAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTMT+
Sbjct: 61  PIRRPISADSAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMTD 106


>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
          Length = 1639

 Score =  184 bits (449), Expect = 1e-46
 Identities = 92/112 (82%), Positives = 101/112 (90%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE A+VVIIDM DP+N
Sbjct: 1   MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN 60

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISADSAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTMT+
Sbjct: 61  PIRRPISADSAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMTD 106


>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
           polypeptide protein.
          Length = 1640

 Score =  175 bits (427), Expect = 6e-44
 Identities = 87/112 (77%), Positives = 97/112 (86%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE A+V IIDM+DP  
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVTIIDMSDPMA 60

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISA+SAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTM E
Sbjct: 61  PIRRPISAESAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMAE 106


>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1569

 Score =  175 bits (427), Expect = 6e-44
 Identities = 87/112 (77%), Positives = 97/112 (86%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE A+V IIDM+DP  
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVTIIDMSDPMA 60

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISA+SAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTM E
Sbjct: 61  PIRRPISAESAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMAE 106


>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1626

 Score =  175 bits (427), Expect = 6e-44
 Identities = 87/112 (77%), Positives = 97/112 (86%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE A+V IIDM+DP  
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVTIIDMSDPMA 60

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISA+SAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTM E
Sbjct: 61  PIRRPISAESAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMAE 106


>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
           protein.
          Length = 1640

 Score =  175 bits (427), Expect = 6e-44
 Identities = 87/112 (77%), Positives = 97/112 (86%)
 Frame = +3

Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE A+V IIDM+DP  
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVTIIDMSDPMA 60

Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
           PIR+PISA+SAIMNPASKVIALK      A KTLQIFNIEMKSKMKAHTM E
Sbjct: 61  PIRRPISAESAIMNPASKVIALK------AGKTLQIFNIEMKSKMKAHTMAE 106


>AF492460-1|AAN64030.1| 1322|Homo sapiens WD repeat 17 protein.
          Length = 1322

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 479 VRLHFGFHL-DIENLKCFLSFNTSFAFQSNDFTSWI 375
           V LH+G  L D E+L C  +FN   A  S    +W+
Sbjct: 242 VNLHYGIRLVDSESLSCITTFNLPSAAASVQCLAWV 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,166,471
Number of Sequences: 237096
Number of extensions: 1476571
Number of successful extensions: 7130
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7123
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)