Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2116
(529 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy... 177 6e-45
AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p pro... 177 6e-45
AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD... 177 6e-45
AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC... 177 6e-45
AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB... 177 6e-45
AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA... 177 6e-45
AF145658-1|AAD38633.1| 656|Drosophila melanogaster BcDNA.GH1022... 29 5.2
AE014296-1350|AAN12033.1| 509|Drosophila melanogaster CG8042-PB... 29 5.2
AE014296-1349|AAF50501.1| 656|Drosophila melanogaster CG8042-PA... 29 5.2
Y00221-1|CAA68368.1| 710|Drosophila melanogaster protein ( Dros... 28 6.8
J03148-1|AAA28442.1| 710|Drosophila melanogaster protein ( D.me... 28 6.8
AY119565-1|AAM50219.1| 637|Drosophila melanogaster HL01076p pro... 28 6.8
AE014297-1438|AAF54736.1| 637|Drosophila melanogaster CG3132-PA... 28 6.8
AE014134-1863|AAF52934.2| 710|Drosophila melanogaster CG5102-PA... 28 6.8
BT021405-1|AAX33553.1| 503|Drosophila melanogaster LD10247p pro... 28 9.0
AY118384-1|AAM48413.1| 307|Drosophila melanogaster RE28669p pro... 28 9.0
AE014134-1474|AAZ66587.1| 591|Drosophila melanogaster CG17291-P... 28 9.0
AE014134-1473|AAF52650.2| 591|Drosophila melanogaster CG17291-P... 28 9.0
>Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy
chain protein.
Length = 1678
Score = 177 bits (432), Expect = 6e-45
Identities = 92/112 (82%), Positives = 96/112 (85%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
M Q LPIRFQEHLQLTNVGIN S SF+TLTMESDKFICVREKV +TA+VVIIDM D TN
Sbjct: 1 MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDATN 60
Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
P R+PISADSAIMNPASKVIALK AQKTLQIFNIEMKSKMKAHTM E
Sbjct: 61 PTRRPISADSAIMNPASKVIALK------AQKTLQIFNIEMKSKMKAHTMNE 106
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 485 DRNIVFWKWISLNTL 529
+ ++VFWKWISLNTL
Sbjct: 105 NEDVVFWKWISLNTL 119
>AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p
protein.
Length = 1678
Score = 177 bits (432), Expect = 6e-45
Identities = 92/112 (82%), Positives = 96/112 (85%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
M Q LPIRFQEHLQLTNVGIN S SF+TLTMESDKFICVREKV +TA+VVIIDM D TN
Sbjct: 1 MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDATN 60
Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
P R+PISADSAIMNPASKVIALK AQKTLQIFNIEMKSKMKAHTM E
Sbjct: 61 PTRRPISADSAIMNPASKVIALK------AQKTLQIFNIEMKSKMKAHTMNE 106
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 485 DRNIVFWKWISLNTL 529
+ ++VFWKWISLNTL
Sbjct: 105 NEDVVFWKWISLNTL 119
>AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD,
isoform D protein.
Length = 1678
Score = 177 bits (432), Expect = 6e-45
Identities = 92/112 (82%), Positives = 96/112 (85%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
M Q LPIRFQEHLQLTNVGIN S SF+TLTMESDKFICVREKV +TA+VVIIDM D TN
Sbjct: 1 MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDATN 60
Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
P R+PISADSAIMNPASKVIALK AQKTLQIFNIEMKSKMKAHTM E
Sbjct: 61 PTRRPISADSAIMNPASKVIALK------AQKTLQIFNIEMKSKMKAHTMNE 106
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 485 DRNIVFWKWISLNTL 529
+ ++VFWKWISLNTL
Sbjct: 105 NEDVVFWKWISLNTL 119
>AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC,
isoform C protein.
Length = 1678
Score = 177 bits (432), Expect = 6e-45
Identities = 92/112 (82%), Positives = 96/112 (85%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
M Q LPIRFQEHLQLTNVGIN S SF+TLTMESDKFICVREKV +TA+VVIIDM D TN
Sbjct: 1 MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDATN 60
Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
P R+PISADSAIMNPASKVIALK AQKTLQIFNIEMKSKMKAHTM E
Sbjct: 61 PTRRPISADSAIMNPASKVIALK------AQKTLQIFNIEMKSKMKAHTMNE 106
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 485 DRNIVFWKWISLNTL 529
+ ++VFWKWISLNTL
Sbjct: 105 NEDVVFWKWISLNTL 119
>AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB,
isoform B protein.
Length = 1678
Score = 177 bits (432), Expect = 6e-45
Identities = 92/112 (82%), Positives = 96/112 (85%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
M Q LPIRFQEHLQLTNVGIN S SF+TLTMESDKFICVREKV +TA+VVIIDM D TN
Sbjct: 1 MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDATN 60
Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
P R+PISADSAIMNPASKVIALK AQKTLQIFNIEMKSKMKAHTM E
Sbjct: 61 PTRRPISADSAIMNPASKVIALK------AQKTLQIFNIEMKSKMKAHTMNE 106
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 485 DRNIVFWKWISLNTL 529
+ ++VFWKWISLNTL
Sbjct: 105 NEDVVFWKWISLNTL 119
>AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA,
isoform A protein.
Length = 1678
Score = 177 bits (432), Expect = 6e-45
Identities = 92/112 (82%), Positives = 96/112 (85%)
Frame = +3
Query: 156 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVVIIDMADPTN 335
M Q LPIRFQEHLQLTNVGIN S SF+TLTMESDKFICVREKV +TA+VVIIDM D TN
Sbjct: 1 MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDATN 60
Query: 336 PIRQPISADSAIMNPASKVIALKGKAGVEAQKTLQIFNIEMKSKMKAHTMTE 491
P R+PISADSAIMNPASKVIALK AQKTLQIFNIEMKSKMKAHTM E
Sbjct: 61 PTRRPISADSAIMNPASKVIALK------AQKTLQIFNIEMKSKMKAHTMNE 106
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 485 DRNIVFWKWISLNTL 529
+ ++VFWKWISLNTL
Sbjct: 105 NEDVVFWKWISLNTL 119
>AF145658-1|AAD38633.1| 656|Drosophila melanogaster BcDNA.GH10229
protein.
Length = 656
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 330 TNPIRQPISADSAIMNPASKVIALKGKAGVEAQ 428
TNP P++A A + A +L+GK+G EA+
Sbjct: 184 TNPPNSPVAASLASIPAAVSTSSLEGKSGSEAE 216
>AE014296-1350|AAN12033.1| 509|Drosophila melanogaster CG8042-PB,
isoform B protein.
Length = 509
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 330 TNPIRQPISADSAIMNPASKVIALKGKAGVEAQ 428
TNP P++A A + A +L+GK+G EA+
Sbjct: 37 TNPPNSPVAASLASIPAAVSTSSLEGKSGSEAE 69
>AE014296-1349|AAF50501.1| 656|Drosophila melanogaster CG8042-PA,
isoform A protein.
Length = 656
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 330 TNPIRQPISADSAIMNPASKVIALKGKAGVEAQ 428
TNP P++A A + A +L+GK+G EA+
Sbjct: 184 TNPPNSPVAASLASIPAAVSTSSLEGKSGSEAE 216
>Y00221-1|CAA68368.1| 710|Drosophila melanogaster protein (
Drosophila mRNA forthe sex determining gene
daughterless. ).
Length = 710
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 5 GVIGSSYYSEPAKFIRPYSSSCRILEVS 88
G GSSY+S+PA+ + P S + + +S
Sbjct: 652 GTPGSSYHSQPAQLVPPSSQTISTMTIS 679
>J03148-1|AAA28442.1| 710|Drosophila melanogaster protein (
D.melanogaster daughterlessprotein (da) mRNA, complete
cds. ).
Length = 710
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 5 GVIGSSYYSEPAKFIRPYSSSCRILEVS 88
G GSSY+S+PA+ + P S + + +S
Sbjct: 652 GTPGSSYHSQPAQLVPPSSQTISTMTIS 679
>AY119565-1|AAM50219.1| 637|Drosophila melanogaster HL01076p
protein.
Length = 637
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = -3
Query: 413 SFAFQSNDFTSWIHDSRVGTDWLSNWICWICHINNDNFCSLTNLLANTDKLVRFHGESVE 234
++ Q NDF + D R+ LSNW + +++ +L L+ +D+ VR + ++
Sbjct: 479 NYGRQLNDFKGILRDVRLDKQVLSNWN--MTQFPLESYDNLEQLITQSDEAVRQGFQELK 536
Query: 233 RNRSRI 216
+ R+ +
Sbjct: 537 KLRTML 542
>AE014297-1438|AAF54736.1| 637|Drosophila melanogaster CG3132-PA
protein.
Length = 637
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = -3
Query: 413 SFAFQSNDFTSWIHDSRVGTDWLSNWICWICHINNDNFCSLTNLLANTDKLVRFHGESVE 234
++ Q NDF + D R+ LSNW + +++ +L L+ +D+ VR + ++
Sbjct: 479 NYGRQLNDFKGILRDVRLDKQVLSNWN--MTQFPLESYDNLEQLITQSDEAVRQGFQELK 536
Query: 233 RNRSRI 216
+ R+ +
Sbjct: 537 KLRTML 542
>AE014134-1863|AAF52934.2| 710|Drosophila melanogaster CG5102-PA
protein.
Length = 710
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 5 GVIGSSYYSEPAKFIRPYSSSCRILEVS 88
G GSSY+S+PA+ + P S + + +S
Sbjct: 652 GTPGSSYHSQPAQLVPPSSQTISTMTIS 679
>BT021405-1|AAX33553.1| 503|Drosophila melanogaster LD10247p
protein.
Length = 503
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 129 LCRTE*SINMAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVV 308
L E +++AQ+LP EHL L + + S+ M ++KF+ +++ VG E+
Sbjct: 136 LLAVEACVSIAQLLPQDDVEHLVLPTLRQCASDSSWRVRYMVAEKFVDLQKAVG--PEIT 193
Query: 309 IIDM 320
+D+
Sbjct: 194 RVDL 197
>AY118384-1|AAM48413.1| 307|Drosophila melanogaster RE28669p
protein.
Length = 307
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 129 LCRTE*SINMAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVV 308
L E +++AQ+LP EHL L + + S+ M ++KF+ +++ VG E+
Sbjct: 224 LLAVEACVSIAQLLPQDDVEHLVLPTLRQCASDSSWRVRYMVAEKFVDLQKAVG--PEIT 281
Query: 309 IIDM 320
+D+
Sbjct: 282 RVDL 285
>AE014134-1474|AAZ66587.1| 591|Drosophila melanogaster CG17291-PB,
isoform B protein.
Length = 591
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 129 LCRTE*SINMAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVV 308
L E +++AQ+LP EHL L + + S+ M ++KF+ +++ VG E+
Sbjct: 224 LLAVEACVSIAQLLPQDDVEHLVLPTLRQCASDSSWRVRYMVAEKFVDLQKAVG--PEIT 281
Query: 309 IIDM 320
+D+
Sbjct: 282 RVDL 285
>AE014134-1473|AAF52650.2| 591|Drosophila melanogaster CG17291-PA,
isoform A protein.
Length = 591
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 129 LCRTE*SINMAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGETAEVV 308
L E +++AQ+LP EHL L + + S+ M ++KF+ +++ VG E+
Sbjct: 224 LLAVEACVSIAQLLPQDDVEHLVLPTLRQCASDSSWRVRYMVAEKFVDLQKAVG--PEIT 281
Query: 309 IIDM 320
+D+
Sbjct: 282 RVDL 285
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,222,363
Number of Sequences: 53049
Number of extensions: 450575
Number of successful extensions: 1437
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -