Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2106
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   8.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   8.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 90  KSAVSDPSKCRIVENFKCKT 31
           +S   DP  CR + N +C +
Sbjct: 67  RSISEDPLNCRDLPNSRCNS 86


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 200 NTLFFFKHQQFSTL 159
           N+ +F+K +QF+ L
Sbjct: 40  NSFYFYKTEQFTVL 53


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 103 IFFDKICSIGPFEV 62
           +FF+K  ++ PFE+
Sbjct: 55  VFFEKRSALSPFEL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,144
Number of Sequences: 336
Number of extensions: 1923
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)