Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2105
         (362 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z83105-6|CAB05487.2|  245|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    26   9.3  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    26   9.3  
U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical p...    26   9.3  
U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical p...    26   9.3  
U50311-2|AAA92308.2|  486|Caenorhabditis elegans Hypothetical pr...    26   9.3  
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    26   9.3  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 221 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLILVKACGLNFQDLIV 358
           MRA V+  FG    ++ ++   P + + +VL+   A G+N  D  +
Sbjct: 10  MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYI 55


>Z83105-6|CAB05487.2|  245|Caenorhabditis elegans Hypothetical
           protein F14H3.6 protein.
          Length = 245

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -1

Query: 356 LSNLESLGRRLSRESGPR--PHQRSAQ 282
           L NLE +GR+L RES  +  P+Q S Q
Sbjct: 111 LENLELVGRQLPRESSSQGNPNQESVQ 137


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 61  PPPIIKMTESTDPAGTPAPEKTPDRKW 141
           P P  K+    +P   P P K P +KW
Sbjct: 254 PSPTKKVPVKKEPEVPPTPIKNPTKKW 280


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 58   HPPPIIKMTESTDPAGTPAPEKTP 129
            HPPP+I       P G P P+  P
Sbjct: 1005 HPPPVIMGPPIIRPFGAPPPQFIP 1028


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 58   HPPPIIKMTESTDPAGTPAPEKTP 129
            HPPP+I       P G P P+  P
Sbjct: 1005 HPPPVIMGPPIIRPFGAPPPQFIP 1028


>U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK354.2a protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 312 RTSPSPTVGSGFLSILTVLRPPNPVS 235
           RT+P  T  +GF  +LTV+R P  V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical
           protein ZK354.2b protein.
          Length = 437

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 312 RTSPSPTVGSGFLSILTVLRPPNPVS 235
           RT+P  T  +GF  +LTV+R P  V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>U50311-2|AAA92308.2|  486|Caenorhabditis elegans Hypothetical
           protein C25E10.4 protein.
          Length = 486

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 98  GSVLSVILMIGGGWI*TSSVR 36
           GS++S++ M+  GW  T +VR
Sbjct: 285 GSIMSILFMVQYGWTGTETVR 305


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 224 RAVVLTGFGGLKTVKILKKPEPTVGEGEVLILVKACGLNFQDL 352
           RA++   +GG   +K L  P+P   E E+L+ ++  G+   D+
Sbjct: 11  RALIFESYGGPLEIKQLPIPQP--NEDELLVKMEYSGICHSDV 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,628,521
Number of Sequences: 27780
Number of extensions: 143825
Number of successful extensions: 428
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)