Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2105
         (362 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   2.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   2.6  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   3.4  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   3.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.9  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   5.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   7.8  

>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 89  VRTPPGLQHRRRPP 130
           +R+PP   H R PP
Sbjct: 469 LRSPPAFSHSRCPP 482


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 89  VRTPPGLQHRRRPP 130
           +R+PP   H R PP
Sbjct: 469 LRSPPAFSHSRCPP 482


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 230 RRAFPWAVGSHPFSPR 183
           RR FP   G  PF+P+
Sbjct: 31  RRPFPTFPGQGPFNPK 46


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 230 RRAFPWAVGSHPFSPR 183
           RR FP   G  PF+P+
Sbjct: 17  RRPFPTFPGQGPFNPK 32


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 132 VGGLLRCWSP 103
           VGG + CW P
Sbjct: 312 VGGFVACWLP 321


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 132 VGGLLRCWSP 103
           VGG + CW P
Sbjct: 15  VGGFILCWLP 24


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 132 VGGLLRCWSP 103
           VGG + CW P
Sbjct: 463 VGGFILCWLP 472


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 67  PIIKMTESTDPAGTPAPEKTP 129
           PII        +G P P+ +P
Sbjct: 7   PIITQQSQQPSSGAPGPQPSP 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,645
Number of Sequences: 438
Number of extensions: 1736
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)