Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2104
(301 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050614-1|AAH50614.1| 420|Homo sapiens RNA methyltransferase l... 58 7e-09
BC011550-1|AAH11550.1| 420|Homo sapiens RNA methyltransferase l... 58 7e-09
AK222900-1|BAD96620.1| 420|Homo sapiens RNA methyltransferase l... 58 7e-09
AK001443-1|BAA91694.1| 420|Homo sapiens protein ( Homo sapiens ... 58 7e-09
AF177344-1|AAG17988.2| 420|Homo sapiens unknown protein. 58 7e-09
AY533564-1|AAS45545.2| 2039|Homo sapiens ankyrin repeat-containi... 28 6.2
AY373757-1|AAR25662.1| 2062|Homo sapiens ankyrin repeat-containi... 28 6.2
AF317425-1|AAG38609.1| 2062|Homo sapiens GAC-1 protein. 28 6.2
AB020681-1|BAA74897.1| 601|Homo sapiens KIAA0874 protein protein. 28 6.2
>BC050614-1|AAH50614.1| 420|Homo sapiens RNA methyltransferase like
1 protein.
Length = 420
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -3
Query: 230 YGVDYSTFSHSTLIIGGETEGISEDSYKCASSRNGLRLNIPLIEGVDSLNTGMATAVIAC 51
Y D+ T + + ++IGGET G+S +S + A S G RL IP++ GVDSLN+ MA +++
Sbjct: 342 YDSDW-TEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLF 400
Query: 50 EIKKQ 36
E K+Q
Sbjct: 401 EGKRQ 405
>BC011550-1|AAH11550.1| 420|Homo sapiens RNA methyltransferase like
1 protein.
Length = 420
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -3
Query: 230 YGVDYSTFSHSTLIIGGETEGISEDSYKCASSRNGLRLNIPLIEGVDSLNTGMATAVIAC 51
Y D+ T + + ++IGGET G+S +S + A S G RL IP++ GVDSLN+ MA +++
Sbjct: 342 YDSDW-TEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLF 400
Query: 50 EIKKQ 36
E K+Q
Sbjct: 401 EGKRQ 405
>AK222900-1|BAD96620.1| 420|Homo sapiens RNA methyltransferase like
1 variant protein.
Length = 420
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -3
Query: 230 YGVDYSTFSHSTLIIGGETEGISEDSYKCASSRNGLRLNIPLIEGVDSLNTGMATAVIAC 51
Y D+ T + + ++IGGET G+S +S + A S G RL IP++ GVDSLN+ MA +++
Sbjct: 342 YDSDW-TEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLF 400
Query: 50 EIKKQ 36
E K+Q
Sbjct: 401 EGKRQ 405
>AK001443-1|BAA91694.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10581 fis, clone NT2RP2003543, weakly similar to
HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE SLR1673 (EC
2.1.1.-). ).
Length = 420
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -3
Query: 230 YGVDYSTFSHSTLIIGGETEGISEDSYKCASSRNGLRLNIPLIEGVDSLNTGMATAVIAC 51
Y D+ T + + ++IGGET G+S +S + A S G RL IP++ GVDSLN+ MA +++
Sbjct: 342 YDSDW-TEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLF 400
Query: 50 EIKKQ 36
E K+Q
Sbjct: 401 EGKRQ 405
>AF177344-1|AAG17988.2| 420|Homo sapiens unknown protein.
Length = 420
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -3
Query: 230 YGVDYSTFSHSTLIIGGETEGISEDSYKCASSRNGLRLNIPLIEGVDSLNTGMATAVIAC 51
Y D+ T + + ++IGGET G+S +S + A S G RL IP++ GVDSLN+ MA +++
Sbjct: 342 YDSDW-TEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLF 400
Query: 50 EIKKQ 36
E K+Q
Sbjct: 401 EGKRQ 405
>AY533564-1|AAS45545.2| 2039|Homo sapiens ankyrin repeat-containing
cofactor-2 protein.
Length = 2039
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 290 KNTVEDSHDSLASTIPVLPYYGVDYSTFSHSTLIIG 183
+ +E+ L S IP P Y +Y TF+ S L+ G
Sbjct: 1820 RKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDG 1855
>AY373757-1|AAR25662.1| 2062|Homo sapiens ankyrin repeat-containing
protein protein.
Length = 2062
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 290 KNTVEDSHDSLASTIPVLPYYGVDYSTFSHSTLIIG 183
+ +E+ L S IP P Y +Y TF+ S L+ G
Sbjct: 1843 RKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDG 1878
>AF317425-1|AAG38609.1| 2062|Homo sapiens GAC-1 protein.
Length = 2062
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 290 KNTVEDSHDSLASTIPVLPYYGVDYSTFSHSTLIIG 183
+ +E+ L S IP P Y +Y TF+ S L+ G
Sbjct: 1843 RKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDG 1878
>AB020681-1|BAA74897.1| 601|Homo sapiens KIAA0874 protein protein.
Length = 601
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 290 KNTVEDSHDSLASTIPVLPYYGVDYSTFSHSTLIIG 183
+ +E+ L S IP P Y +Y TF+ S L+ G
Sbjct: 382 RKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDG 417
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,176,909
Number of Sequences: 237096
Number of extensions: 678770
Number of successful extensions: 3131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3131
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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