Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2104
         (301 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071079-1|AAL48701.1|  386|Drosophila melanogaster RE14730p pro...    52   1e-07
AE014296-3175|AAF49141.1|  407|Drosophila melanogaster CG14100-P...    52   1e-07
BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p pro...    26   7.7  
AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-P...    26   7.7  

>AY071079-1|AAL48701.1|  386|Drosophila melanogaster RE14730p
           protein.
          Length = 386

 Score = 52.0 bits (119), Expect = 1e-07
 Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = -3

Query: 206 SHSTLIIGGETEGISEDSYKCAS--SRNGLRLNIPLIEGVDSLNTGMATAVIACEIKKQF 33
           +H+ LIIGGE+ G+SE++Y+  +     G  + IPL  G+DSLN   A  ++  E++++ 
Sbjct: 319 AHNLLIIGGESHGVSEEAYRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELRRKL 378

Query: 32  VQAWSKKK 9
           +   S+K+
Sbjct: 379 IHQASEKE 386


>AE014296-3175|AAF49141.1|  407|Drosophila melanogaster CG14100-PA
           protein.
          Length = 407

 Score = 52.0 bits (119), Expect = 1e-07
 Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = -3

Query: 206 SHSTLIIGGETEGISEDSYKCAS--SRNGLRLNIPLIEGVDSLNTGMATAVIACEIKKQF 33
           +H+ LIIGGE+ G+SE++Y+  +     G  + IPL  G+DSLN   A  ++  E++++ 
Sbjct: 340 AHNLLIIGGESHGVSEEAYRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELRRKL 399

Query: 32  VQAWSKKK 9
           +   S+K+
Sbjct: 400 IHQASEKE 407


>BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p
           protein.
          Length = 413

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 71  PYQCSDCLRLL*GEYSVSVH 130
           PYQCS C++    +Y++ VH
Sbjct: 174 PYQCSFCIQRFAQKYNLKVH 193


>AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-PA
           protein.
          Length = 413

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 71  PYQCSDCLRLL*GEYSVSVH 130
           PYQCS C++    +Y++ VH
Sbjct: 174 PYQCSFCIQRFAQKYNLKVH 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,672,604
Number of Sequences: 53049
Number of extensions: 205905
Number of successful extensions: 730
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)