Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2103
         (498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P74370 Cluster: Slr1648 protein; n=1; Synechocystis sp....    33   3.6  
UniRef50_Q8IE62 Cluster: Putative uncharacterized protein PF13_0...    32   6.2  
UniRef50_Q0IHV7 Cluster: LOC779553 protein; n=1; Xenopus tropica...    32   8.2  

>UniRef50_P74370 Cluster: Slr1648 protein; n=1; Synechocystis sp.
           PCC 6803|Rep: Slr1648 protein - Synechocystis sp.
           (strain PCC 6803)
          Length = 480

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 447 ESPPKGRYLYDKYNMSFP-GLWMYIKYMYVYTNIIK 343
           E    GRYLY  Y M  P G+W Y K +   T+++K
Sbjct: 90  EEEKAGRYLYGNYGMVDPQGVWHYWKSLLTQTDVLK 125


>UniRef50_Q8IE62 Cluster: Putative uncharacterized protein
           PF13_0146; n=2; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0146 - Plasmodium falciparum (isolate 3D7)
          Length = 1533

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -1

Query: 417 DKYNMSFPG---LWMYIKYMYVYTNIIKRKN 334
           +KYNMSFP    +  Y+KY YVY  +  +KN
Sbjct: 388 NKYNMSFPEERIILSYVKYYYVYRLVNMKKN 418


>UniRef50_Q0IHV7 Cluster: LOC779553 protein; n=1; Xenopus
           tropicalis|Rep: LOC779553 protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 740

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -1

Query: 423 LYDKYNMSFPGLWMYIKYMYVYTN---IIKRKNLFVCLFRIGSGTTG 292
           LYDK+ M F  L +   ++YVY N   +I+  NLF+     G  TTG
Sbjct: 326 LYDKFVMFFQSLTLP-PHLYVYVNSLNVIRWDNLFLTSVLAGQNTTG 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,615,449
Number of Sequences: 1657284
Number of extensions: 8298332
Number of successful extensions: 17510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17502
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)