Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2102
(402 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 83 6e-17
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 82 2e-16
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 80 7e-16
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 80 7e-16
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 80 7e-16
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 80 7e-16
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 80 7e-16
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 80 7e-16
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 80 7e-16
12_02_1282 + 27528159-27529148,27529549-27529614 79 2e-15
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 50 9e-07
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 44 3e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 40 0.001
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 39 0.002
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 33 0.064
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 33 0.085
06_01_1199 - 10313329-10314858 29 1.4
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 28 3.2
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 27 5.6
11_06_0545 + 24839536-24843421,24843871-24844310 27 7.3
09_02_0082 - 4060018-4061604 27 7.3
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 27 7.3
11_01_0477 - 3688357-3690042 26 9.7
02_05_0477 - 29339649-29340253,29340880-29341492 26 9.7
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 83.4 bits (197), Expect = 6e-17
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
M DE++ +V DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 47
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
M +E++ +V DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 47
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 79.8 bits (188), Expect = 7e-16
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
E++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 78.6 bits (185), Expect = 2e-15
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
+++ LV DNG GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG 48
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 49.6 bits (113), Expect = 9e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSI 335
+EV+A+V+D G CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 255 LVVDNGFGMCKAGFAGDDAPRAVFPSIVGRP 347
+V DNG G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 255 LVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQ 356
+V+DNG + G+AG+ PR F +IV RPRH+
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR 55
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 255 LVVDNGFGMCKAGFAGDDAPRAVFPSIVGRP 347
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 33.5 bits (73), Expect = 0.064
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 252 ALVVDNGFGMCKAGFAGDDAPRAVFPSIV 338
A+V+DNG G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 33.1 bits (72), Expect = 0.085
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 252 ALVVDNGFGMCKAGFAGDDAPRAVFPSIV 338
A+V+DNG G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>06_01_1199 - 10313329-10314858
Length = 509
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 350 AGPSHDGGEHGA-RSIISCETGLAHTEAIVYYQR--GNFFVAHLELVIKSRNSGTGASHD 180
A + GG H RS ++ +G+ V ++ G V H ++ + ++ T A+H
Sbjct: 29 AAECYGGGRHDVTRSAVARRSGVGSRRQYVRHRLTGGAVDVPHRYMLAEKGSNSTRANHT 88
Query: 179 SPLLLMSLTAHTNLDAP 129
SP S + T +AP
Sbjct: 89 SPAASNSTPSATTTEAP 105
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 300 GDDAPRAVFPSIVGRPRHQGVMVGWDLRPL 389
GDD P + S G H+ + +G D+RPL
Sbjct: 196 GDDDPDVYYTSPGGARNHEYLTIGVDVRPL 225
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Frame = -1
Query: 363 SRPDGGA---FPRWRGTRREEHHL-LRNRPCTY 277
S+ D GA +P+ GT R+ H+ ++NRPC +
Sbjct: 1333 SKADAGASKTYPQQAGTIRKNGHIVIKNRPCKW 1365
>11_06_0545 + 24839536-24843421,24843871-24844310
Length = 1441
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 340 PTMEGN-TARGASSPAKPALHIPKPLSTTNAATSSSHI 230
P+ + N T+RG+S + A+HIP+ + + SH+
Sbjct: 1026 PSKDDNLTSRGSSHESFTAIHIPRGIKNMTSMQILSHV 1063
>09_02_0082 - 4060018-4061604
Length = 528
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 322 TARGASSPAKPALHIPKPLSTTNAATSSSH 233
TA G S+P +P +P PL T + T++ +
Sbjct: 105 TAAGHSTPPEPVPSVPVPLGLTMSPTTAHY 134
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -3
Query: 352 WRGLPTMEGNTARGASSPAKPALHIPKPLSTTNAATSSSH 233
WR P + + ARG S P + AL P++ +++ H
Sbjct: 251 WRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>11_01_0477 - 3688357-3690042
Length = 561
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 360 RPDGGAFPRWRGTRREEHHLLRNRPCT 280
R G +PRW RE +L N PC+
Sbjct: 9 RGAGAGYPRWVILDREAEYLHVNHPCS 35
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIV 338
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,426,135
Number of Sequences: 37544
Number of extensions: 243543
Number of successful extensions: 721
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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