Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2102
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 100 3e-22
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 100 3e-22
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 100 3e-22
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 100 3e-22
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 100 3e-22
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 100 3e-22
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-22
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-22
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 100 8e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 8e-22
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 100 8e-22
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 98 2e-21
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 94 3e-20
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 64 3e-11
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 50 8e-07
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 44 3e-05
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 36 0.014
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 32 0.18
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 32 0.18
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 32 0.18
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 32 0.18
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 31 0.31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 31 0.31
U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical pr... 27 5.0
U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical pr... 27 5.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 3e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD+EVAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 99.5 bits (237), Expect = 8e-22
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD++VAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 8e-22
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD++VAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 99.5 bits (237), Expect = 8e-22
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD++VAALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 97.9 bits (233), Expect = 2e-21
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
MCD++VAAL++DNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 47
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +3
Query: 237 DEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
+EE+AALVVDNG GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 46
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 64.5 bits (150), Expect = 3e-11
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 285 KAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
+AGFAGDDAPRAVFPSIVGRPRHQGVMVG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVG 33
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 49.6 bits (113), Expect = 8e-07
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 255 LVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 371
+V+DNG G+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 255 LVVDNGFGMCKAGFAGDDAPRAVFPSIVGRP 347
+VVDNG G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 35.5 bits (78), Expect = 0.014
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 231 MCDEEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIV 338
M ++ A V+DNG G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 310 ASSPAKPALHIPKPLSTTNAATSSSHILN**LNPGILGPARHTI 179
+SSPA P++ P P +T++ +TSS I + GP++H +
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 695
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 310 ASSPAKPALHIPKPLSTTNAATSSSHILN**LNPGILGPARHTI 179
+SSPA P++ P P +T++ +TSS I + GP++H +
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 696
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 310 ASSPAKPALHIPKPLSTTNAATSSSHILN**LNPGILGPARHTI 179
+SSPA P++ P P +T++ +TSS I + GP++H +
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 696
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 310 ASSPAKPALHIPKPLSTTNAATSSSHILN**LNPGILGPARHTI 179
+SSPA P++ P P +T++ +TSS I + GP++H +
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHIL 696
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.31
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 252 ALVVDNGFGMCKAGFAGDDAPRAVFPSIVGRPRHQG 359
AL N F KA + G D P+A F I+G ++G
Sbjct: 33 ALGTINCFHFIKASYLGHDTPQATFREIIGNKEYRG 68
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 240 EEVAALVVDNGFGMCKAGFAGDDAPRAVFPSIV 338
+EV+ LV D G + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical
protein F11D5.1c protein.
Length = 769
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = -1
Query: 210 PEFWD--RRVTRFTP-----IANVTDRTH*SRCTNPLTTVNRYHNHLIYLKT 76
PEF RR+ RF P ANVT+ + + T TT+N +N+ I++ +
Sbjct: 212 PEFVQIARRLRRFQPEIHDTFANVTNVSSNTNVTTTTTTINNNNNNNIHINS 263
>U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical
protein F11D5.1a protein.
Length = 812
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = -1
Query: 210 PEFWD--RRVTRFTP-----IANVTDRTH*SRCTNPLTTVNRYHNHLIYLKT 76
PEF RR+ RF P ANVT+ + + T TT+N +N+ I++ +
Sbjct: 255 PEFVQIARRLRRFQPEIHDTFANVTNVSSNTNVTTTTTTINNNNNNNIHINS 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,389,239
Number of Sequences: 27780
Number of extensions: 194376
Number of successful extensions: 568
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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