Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2101
(408 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0800 + 11337206-11337532,11337634-11337957,11338060-113381... 57 6e-09
07_03_1743 - 29167078-29167290,29167389-29168159 51 3e-07
05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566... 51 4e-07
04_04_0516 + 25833801-25834046,25834412-25834532,25834636-258348... 50 5e-07
01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940... 50 7e-07
03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555 50 9e-07
02_05_0007 + 24918163-24918420,24919360-24919410,24919411-249194... 48 2e-06
02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 44 6e-05
10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821... 36 0.016
04_04_0739 - 27693768-27694305,27694765-27694912,27694987-276951... 32 0.20
02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093... 29 1.1
06_02_0308 + 14124373-14124706,14124888-14124910 29 1.4
10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 28 3.3
01_05_0513 - 22864657-22867899 28 3.3
05_06_0161 + 26078019-26078510 27 5.7
08_01_0793 - 7685702-7686955 27 7.6
>03_02_0800 +
11337206-11337532,11337634-11337957,11338060-11338194,
11338280-11338519
Length = 341
Score = 56.8 bits (131), Expect = 6e-09
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 55 SNRAWVT-LATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
+ RA+VT LA + Y G + LA LR+ G YP V + P V E+ R L + V
Sbjct: 21 ATRAYVTFLAGDGDYWKGVVGLAKGLRKVGSAYPLVVAVLPDVPESHRRILISQGCIVRE 80
Query: 232 VD-VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKLRLKLFE 402
++ V + A+ A I ++K+ W +YE+ V+LDADI V + +LFE
Sbjct: 81 IEPVYPPENQTQFAM---AYYVINYSKLRIWEFVEYERMVYLDADIQVFDNID-ELFE 134
>07_03_1743 - 29167078-29167290,29167389-29168159
Length = 327
Score = 51.2 bits (117), Expect = 3e-07
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 61 RAWVT-LATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
RA+VT LA + Y G + LA LRR YP V + P V R +L V V +
Sbjct: 18 RAYVTFLAGDGDYWKGVVGLAKGLRRVRSAYPLVVAVLPDVPGEHRRKL--VEQGCVVRE 75
Query: 238 VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
+ A I ++K+ W +YE+ V+LDADI V +
Sbjct: 76 IQPVYPPESQTQFAMAYYVINYSKLRIWEFVEYERMVYLDADIQVFDNI 124
>05_04_0376 -
20754386-20755392,20755683-20756320,20756433-20756627,
20757730-20757795,20757942-20758007,20758402-20758445
Length = 671
Score = 50.8 bits (116), Expect = 4e-07
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +1
Query: 64 AWVTLATNDS-YGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDV 240
A+ T+ + S Y GA+ A S+R+AG V L+ T+S+ R L A +V +
Sbjct: 348 AYATILHSASEYVCGAISAAQSIRQAGSTRDLVILVDDTISDHHRKGLEAAGWKVRVIQR 407
Query: 241 LDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
+ + A A + ++K W LT Y+K +F+DAD+L+++ +
Sbjct: 408 IRNPKAERDAYNEW-----NYSKFRLWQLTDYDKIIFIDADLLILRNV 450
>04_04_0516 +
25833801-25834046,25834412-25834532,25834636-25834821,
25834918-25834944,25836203-25836351,25836553-25836602,
25837181-25837289,25837395-25837532,25838184-25838463,
25838533-25838656,25838994-25839003
Length = 479
Score = 50.4 bits (115), Expect = 5e-07
Identities = 34/110 (30%), Positives = 57/110 (51%)
Frame = +1
Query: 55 SNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTV 234
+ A+VTL D + LG VL S+R G V L++ VS+ R L+A V +
Sbjct: 32 TEEAYVTLLYGDEFVLGVRVLGKSIRDTGTRRDLVVLVSDGVSDYSRKLLQADGWIVSHI 91
Query: 235 DVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
+L + + + G+ +TK+ +N+T Y K V+LDAD +V++ +
Sbjct: 92 TLLANPNQVR----PKRFWGV-YTKLKIFNMTSYRKVVYLDADTVVVKSI 136
>01_06_1550 +
38191957-38192054,38193084-38193284,38193456-38194090,
38194398-38195419
Length = 651
Score = 50.0 bits (114), Expect = 7e-07
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 64 AWVTLATNDS-YGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDV 240
A+ T+ + S Y GA+ A S+R+AG V L+ T+S R L A +V +
Sbjct: 323 AYATILHSASEYVCGAITAAQSIRQAGSTRDFVILVDETISNHHRKGLEAAGWKVRIIQR 382
Query: 241 LDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
+ + A A + ++K W LT Y+K +F+DAD+L+++ +
Sbjct: 383 IRNPKAERDAYNEW-----NYSKFRLWQLTDYDKIIFIDADLLILRNV 425
>03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555
Length = 614
Score = 49.6 bits (113), Expect = 9e-07
Identities = 35/103 (33%), Positives = 52/103 (50%)
Frame = +1
Query: 76 LATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRD 255
L ++D+Y GA+VLA S+RRAG V L TVS+ L A + + +
Sbjct: 330 LHSSDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSKPALAALVAAGWTPRKIKRIRNPR 389
Query: 256 AAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
A + ++K W LT Y++ VF+DADILV++ L
Sbjct: 390 AERGTYNE-----YNYSKFRLWQLTDYDRVVFVDADILVLRDL 427
>02_05_0007 +
24918163-24918420,24919360-24919410,24919411-24919480,
24919645-24919830,24920127-24920275,24921310-24921417,
24921501-24921638,24922574-24922853,24922924-24923047,
24923197-24923312,24923612-24923619
Length = 495
Score = 48.4 bits (110), Expect = 2e-06
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
+ A+VTL D + LG VL S+R V L++ VSE R L A V +
Sbjct: 37 DEAYVTLLYGDEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEADGFIVKHIT 96
Query: 238 VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
+L A+ ++ +TK+ +N+T Y+K +LDAD +V++ +
Sbjct: 97 LL-----ANPNQVRPTRFWGVYTKLKIFNMTSYKKVAYLDADTIVVKSI 140
>02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345
Length = 654
Score = 43.6 bits (98), Expect = 6e-05
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Frame = +1
Query: 76 LATNDSYGLGALVLAHSLRRAGLV-YPA------VALITPTVSEAMRDRLRAVFSEVVTV 234
L + + Y GALV A S+R A P+ VAL+ T+S R L A +V +
Sbjct: 321 LHSEELYACGALVAAQSIRMASASGAPSEPERDMVALVDETISARHRGALEAAGWKVRAI 380
Query: 235 DVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILV 372
+ + AA A + ++K W+LT+Y++ VFLDAD+LV
Sbjct: 381 RRVRNPRAAADAYNEW-----NYSKFWLWSLTEYDRVVFLDADLLV 421
>10_08_0883 +
21279913-21280235,21281066-21281327,21281998-21282199,
21282289-21282436,21282541-21283084
Length = 492
Score = 35.5 bits (78), Expect = 0.016
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +1
Query: 112 VLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSE----VVTVDVLDSRDAAHLALLQ 279
V+ SL R G V + + V D +RA+ E VV V+ + + ++L +
Sbjct: 78 VMMRSLARIGADADRVLIASADVPA---DWVRAMREEDGMRVVLVENMKNPYESNLGGIN 134
Query: 280 RAELGITFTKIHCWNLTQYEKCVFLDADILVIQK 381
R +T K++ W L YE+ V +D+D + +QK
Sbjct: 135 R-RFKLTLNKLYAWTLVDYERVVMIDSDNIFLQK 167
>04_04_0739 -
27693768-27694305,27694765-27694912,27694987-27695188,
27695802-27695864,27695865-27696120,27697811-27697953
Length = 449
Score = 31.9 bits (69), Expect = 0.20
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +1
Query: 112 VLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRAEL 291
V+ SL R G V + + V L+ +VV+V+ L + R +L
Sbjct: 18 VMMRSLGRLGSDADRVVIASVDVPPRWVQALKDDGVKVVSVENLKNPYEKQGNFNMRFKL 77
Query: 292 GITFTKIHCWNLTQYEKCVFLDADILVIQ 378
T K++ W+L Y++ V LD+D + +Q
Sbjct: 78 --TLNKLYAWSLVSYDRVVMLDSDNIFLQ 104
>02_05_1197 -
34908382-34908582,34908664-34908837,34909239-34909337,
34909444-34909644,34910229-34910336,34910498-34910882,
34911132-34911584,34911868-34912094,34912211-34912270
Length = 635
Score = 29.5 bits (63), Expect = 1.1
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 16 LELSHETTPGFIMSNR-AWVTLATNDSYGLGALVLAHSLRRAGLV-YPAVALITPTV-SE 186
+ L+H TTP + NR + +A+N LGA H LR A V P ++L T SE
Sbjct: 299 VHLTHLTTPESVFHNRLGFAAVASNP---LGAAASGHLLRAASAVASPLLSLFASTFRSE 355
Query: 187 AMR-DRL 204
A R D+L
Sbjct: 356 ANRLDKL 362
>06_02_0308 + 14124373-14124706,14124888-14124910
Length = 118
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 106 ALVLAHSLRRAGLVYPAVALITPTVSEA-MRDRLRAVF 216
+LVL L+ G++ VA + P +SEA +R R +A+F
Sbjct: 25 SLVLLQQLQLLGVLVVVVAGVAPGISEAQVRSRFKAIF 62
>10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223
Length = 254
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 239 TSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRAPKP 96
T+ T + ARR+ L + + S + T PA+RS ST P P
Sbjct: 184 TAAATATATAARRKRLRHAHAMASTSDSDNSTSPAKRSFTPSTPPPPP 231
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELP 68
P GG N P PE+P R P++P
Sbjct: 172 PEGGGGDNAPPPEVPPEAPRDLPDIP 197
>05_06_0161 + 26078019-26078510
Length = 163
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 98 AWELWCWPIRSAAPAWCTLP*HSSHLP 178
AW+ CWP A WC P S H P
Sbjct: 2 AWQRRCWP---RAQRWCRWPSTSPHDP 25
>08_01_0793 - 7685702-7686955
Length = 417
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 163 VLRQGTPSRRGGANGPAPELPSRRSR-LWPELP 68
+L QG+PS++ N P + PS S+ +P+ P
Sbjct: 11 LLNQGSPSQQSSQNSPPTQFPSTFSQSQFPQSP 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,774,152
Number of Sequences: 37544
Number of extensions: 211363
Number of successful extensions: 790
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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