Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2101
(408 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 136 4e-32
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 136 4e-32
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 136 4e-32
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 136 4e-32
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 136 4e-32
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 136 4e-32
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 136 4e-32
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 133 2e-31
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 131 1e-30
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 131 1e-30
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 131 1e-30
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 128 5e-30
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 128 5e-30
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 120 2e-27
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 80 3e-15
U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon prot... 59 5e-09
AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens ... 31 1.1
S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subuni... 30 3.4
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 30 3.4
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 30 3.4
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 30 3.4
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 30 3.4
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 30 3.4
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 29 6.0
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 29 6.0
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 29 6.0
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 29 6.0
EF417879-1|ABN50332.1| 109|Homo sapiens immunoglobulin heavy ch... 29 8.0
EF417878-1|ABN50331.1| 109|Homo sapiens immunoglobulin heavy ch... 29 8.0
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 136 bits (328), Expect = 4e-32
Identities = 63/111 (56%), Positives = 82/111 (73%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VDVLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 111
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 133 bits (322), Expect = 2e-31
Identities = 62/109 (56%), Positives = 80/109 (73%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
++A+VTL TND+Y GALVL SL++ V L TP VS++MR L VF EV+ VD
Sbjct: 1 DQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVD 60
Query: 238 VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VLDS D+AHL L++R ELG+T TK+HCW+LTQY KCVF+DAD LV+ +
Sbjct: 61 VLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANI 109
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 131 bits (316), Expect = 1e-30
Identities = 65/120 (54%), Positives = 81/120 (67%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR L V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 RAVFSEVVTVDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VF EV+ V+++DS D HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 144
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 131 bits (316), Expect = 1e-30
Identities = 65/120 (54%), Positives = 81/120 (67%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR L V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 RAVFSEVVTVDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VF EV+ V+++DS D HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 144
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 131 bits (316), Expect = 1e-30
Identities = 65/120 (54%), Positives = 81/120 (67%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR L V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 RAVFSEVVTVDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
VF EV+ V+++DS D HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 85 SKVFDEVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 144
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 128 bits (310), Expect = 5e-30
Identities = 63/111 (56%), Positives = 78/111 (70%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
++++A+VTLATND Y GALVL SLRR L V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
V+++DS D HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 113
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 128 bits (310), Expect = 5e-30
Identities = 63/111 (56%), Positives = 78/111 (70%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
++++A+VTLATND Y GALVL SLRR L V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
V+++DS D HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 63 VNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 113
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 120 bits (288), Expect = 2e-27
Identities = 59/102 (57%), Positives = 69/102 (67%)
Frame = +1
Query: 79 ATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDA 258
ATND Y GALVL SLRR L V LITP VS +R L VF EV+ V+++DS D
Sbjct: 3 ATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADY 62
Query: 259 AHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 63 IHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 104
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 220 EVVTVDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
EV+ V+++DS D HLA L+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 2 EVIEVNLIDSADYIHLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 56
>U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon
protein.
Length = 298
Score = 59.3 bits (137), Expect = 5e-09
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 277 QRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
+R ELG+T TK+HCW LT Y KCVFLDAD LV+ +
Sbjct: 1 KRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNV 36
>AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ44103 fis, clone TESTI4044084. ).
Length = 161
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 177 GRCDECYGRVHQAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCS 34
G C + G+ +GA R QHQ+ + Q PC H AGCS
Sbjct: 22 GHCPQFQGKKQMSGARAR-AQHQAHSSQESTQCQVSPCPAWHPRAGCS 68
>S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subunit
protein.
Length = 980
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 84 KRLLRLGSSGAGPFAPPRRLGVPCRST 164
+R+ L +SGAG APPR LGVP +T
Sbjct: 937 RRIQALRASGAG--APPRGLGVPAEAT 961
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 34 PSKRALPRDPSSEVPSKRKNSAPQLPLL 61
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 363 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 402
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>EF417879-1|ABN50332.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 31 ETTPGFIMSNRAWVTLATNDSYGLGALVLAHS 126
+T + R W+ +ATND +G G LV S
Sbjct: 76 DTAVYYCARERGWLEMATNDYWGQGTLVTVSS 107
>EF417878-1|ABN50331.1| 109|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 109
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 31 ETTPGFIMSNRAWVTLATNDSYGLGALVLAHS 126
+T + R W+ +ATND +G G LV S
Sbjct: 76 DTAVYYCARERGWLEMATNDYWGQGTLVTVSS 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,147,571
Number of Sequences: 237096
Number of extensions: 1117070
Number of successful extensions: 3440
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3440
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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