Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2101
         (408 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p pro...   158   2e-39
AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB...   158   2e-39
BT001494-1|AAN71249.1|  300|Drosophila melanogaster LD30465p pro...    27   9.5  
AE014297-4459|AAF56957.1|  352|Drosophila melanogaster CG7824-PA...    27   9.5  

>AY121654-1|AAM51981.1|  333|Drosophila melanogaster RE02181p
           protein.
          Length = 333

 Score =  158 bits (384), Expect = 2e-39
 Identities = 76/117 (64%), Positives = 92/117 (78%)
 Frame = +1

Query: 52  MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
           MS  AWVTL TND+Y LGALVLAHSL+RA   +    L+TP VS+AMRDRL+ V++ V  
Sbjct: 1   MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQE 60

Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKLRLKLFE 402
           V+VLDS+DAA+LALL R ELG+TFTK+HCW L Q+EKCVFLDAD LV+Q    +LFE
Sbjct: 61  VNVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCD-ELFE 116


>AE013599-3158|AAF46696.3|  333|Drosophila melanogaster CG9480-PB,
           isoform B protein.
          Length = 333

 Score =  158 bits (384), Expect = 2e-39
 Identities = 76/117 (64%), Positives = 92/117 (78%)
 Frame = +1

Query: 52  MSNRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
           MS  AWVTL TND+Y LGALVLAHSL+RA   +    L+TP VS+AMRDRL+ V++ V  
Sbjct: 1   MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQE 60

Query: 232 VDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKLRLKLFE 402
           V+VLDS+DAA+LALL R ELG+TFTK+HCW L Q+EKCVFLDAD LV+Q    +LFE
Sbjct: 61  VNVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCD-ELFE 116


>BT001494-1|AAN71249.1|  300|Drosophila melanogaster LD30465p
           protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 45  LHNVKSSMGNSGHKRLLRLGSSGAGPFAPPRRLGVPCRSTHH 170
           L +  +++ NS H   ++L      PFAP  R+ +P   T H
Sbjct: 172 LSDCVAAISNSWHDMRIKLVHVSDVPFAPQARIWLPTGQTDH 213


>AE014297-4459|AAF56957.1|  352|Drosophila melanogaster CG7824-PA,
           isoform A protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 45  LHNVKSSMGNSGHKRLLRLGSSGAGPFAPPRRLGVPCRSTHH 170
           L +  +++ NS H   ++L      PFAP  R+ +P   T H
Sbjct: 224 LSDCVAAISNSWHDMRIKLVHVSDVPFAPQARIWLPTGQTDH 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,811,812
Number of Sequences: 53049
Number of extensions: 346262
Number of successful extensions: 1118
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)