Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2101
(408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 127 4e-30
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 127 4e-30
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 127 4e-30
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 118 2e-27
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 3.9
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 27 5.2
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 27 6.9
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 27 6.9
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 27 6.9
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 6.9
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 6.9
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 26 9.1
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 26 9.1
AL032626-15|CAA21535.1| 156|Caenorhabditis elegans Hypothetical... 26 9.1
AC006680-6|AAK72300.1| 335|Caenorhabditis elegans Serpentine re... 26 9.1
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 127 bits (306), Expect = 4e-30
Identities = 59/107 (55%), Positives = 76/107 (71%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
+ AW+TLATND+Y GALVL HSLR AG LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 238 VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQ 378
V +S D+ +L L++R +LG+TFTK+HCW LTQY KCVFLDAD LV++
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLR 108
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 127 bits (306), Expect = 4e-30
Identities = 59/107 (55%), Positives = 76/107 (71%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
+ AW+TLATND+Y GALVL HSLR AG LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 238 VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQ 378
V +S D+ +L L++R +LG+TFTK+HCW LTQY KCVFLDAD LV++
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLR 108
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 127 bits (306), Expect = 4e-30
Identities = 59/107 (55%), Positives = 76/107 (71%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
+ AW+TLATND+Y GALVL HSLR AG LI+ VS +R +L F +V VD
Sbjct: 2 SEAWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVD 61
Query: 238 VLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQ 378
V +S D+ +L L++R +LG+TFTK+HCW LTQY KCVFLDAD LV++
Sbjct: 62 VFNSNDSDNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLR 108
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 118 bits (283), Expect = 2e-27
Identities = 56/113 (49%), Positives = 76/113 (67%)
Frame = +1
Query: 64 AWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 243
AW+TLATND Y GAL L +SL +G LIT +S ++R++L F EV VD+
Sbjct: 4 AWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEVTVVDIF 63
Query: 244 DSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKLRLKLFE 402
+S D+ +L+L+ R +LG+TFTK HCW LTQY K VFLDAD ++I+ +LFE
Sbjct: 64 NSNDSENLSLIGRPDLGVTFTKFHCWRLTQYSKAVFLDADTMIIRNSD-ELFE 115
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/113 (24%), Positives = 58/113 (51%)
Frame = +1
Query: 64 AWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 243
A+V++ +++ + + A VLA+ L++ P + ++T ++E + L+ + V V
Sbjct: 25 AFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELK---QQGVIVRND 81
Query: 244 DSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKLRLKLFE 402
D ++ + + +TKI W +T+++ V LD DIL + + LFE
Sbjct: 82 TKIDTPYIKTHKARKY--QYTKIRLWAMTEFDVIVHLDLDILPTRDIS-TLFE 131
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/113 (24%), Positives = 58/113 (51%)
Frame = +1
Query: 64 AWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVL 243
A+V++ +++ + + A VLA+ L++ P + ++T ++E + L+ + V V
Sbjct: 25 AFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELK---QQGVIVRND 81
Query: 244 DSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKLRLKLFE 402
D ++ + + +TKI W +T+++ V LD DIL + + LFE
Sbjct: 82 TKIDTPYIKTHKARKY--QYTKIRLWAMTEFDVIVHLDLDILPTRDIS-TLFE 131
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 274 GGPGEPRLLSPERQP*LLRRKLREDDP 194
GGPG PRL+ P + P L R++ + P
Sbjct: 1424 GGPGGPRLIMPGQFPQLQGRRIPQQPP 1450
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 274 GGPGEPRLLSPERQP*LLRRKLREDDP 194
GGPG PRL+ P + P L R++ + P
Sbjct: 1424 GGPGGPRLIMPGQFPQLQGRRIPQQPP 1450
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 245 SRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRAPKP 96
S +S +TT +A + S S T S T G T + S AST P
Sbjct: 819 STSSVITTGSTSAPQSSTAVSSTTTSPSTTTGSTPAPQSSTVASTTTVSP 868
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
protein ZK970.6 protein.
Length = 1122
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFS-EVVTV 234
N +W T+ +GLGAL+ H+ + L++ A ++ +++ D V+S ++
Sbjct: 684 NDSWQVKLTD--FGLGALLEEHTPSKKRLLWAAPEVLRGSLTIHQMDPSADVYSFAIIAS 741
Query: 235 DVLDSRDA 258
++L R+A
Sbjct: 742 EILTKREA 749
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 26.6 bits (56), Expect = 6.9
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -2
Query: 245 SRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRAPKP*ESFVARV 72
S S +T KT R S ++ TV SAT A+R A +PKP S V V
Sbjct: 273 SEASYASTRPKTERSSSHKSASTV-TSSATITTLDSAKRKPLAKNASPKPPRSPVLEV 329
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 26.6 bits (56), Expect = 6.9
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -2
Query: 245 SRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRAPKP*ESFVARV 72
S S +T KT R S ++ TV SAT A+R A +PKP S V V
Sbjct: 269 SEASYASTRPKTERSSSHKSASTV-TSSATITTLDSAKRKPLAKNASPKPPRSPVLEV 325
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 248 ESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRA---PKP*E 90
++ +T TTS ARR L + V + A + RR+ A TRA PKP E
Sbjct: 510 DALVNTPTTSSAAARRSGLARNAKKPVRTPRAPRSAGGRRTGGAVTRAQAVPKPVE 565
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 248 ESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRA---PKP*E 90
++ +T TTS ARR L + V + A + RR+ A TRA PKP E
Sbjct: 510 DALVNTPTTSSAAARRSGLARNAKKPVRTPRAPRSAGGRRTGGAVTRAQAVPKPVE 565
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 248 ESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTKPARRSEWASTRA---PKP*E 90
++ +T TTS ARR L + V + A + RR+ A TRA PKP E
Sbjct: 510 DALVNTPTTSSAAARRSGLARNAKKPVRTPRAPRSAGGRRTGGAVTRAQAVPKPVE 565
>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
protein C14C10.4 protein.
Length = 1058
Score = 26.2 bits (55), Expect = 9.1
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 88 DSYGLGALVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHL 267
DS+G+ ++ + LV PA+ L+T TV R+ A+ +++ D D L
Sbjct: 507 DSHGVFQIMYKIVSKDVKLVLPALDLMTNTVWHEKREFGTAIVHQLLHSDKEDHLAIEKL 566
Query: 268 -ALLQRAELG-ITFTKIH 315
LL+ +LG +T ++H
Sbjct: 567 RVLLESNKLGQLTVFRLH 584
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 226 VTVDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
V +D L D + + + F KIHC N + FL DILV+ L
Sbjct: 678 VFLDHLKDTDTSGMDSTMKFPAERLFDKIHCVNPEIRREFYFLIHDILVVDSL 730
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 226 VTVDVLDSRDAAHLALLQRAELGITFTKIHCWNLTQYEKCVFLDADILVIQKL 384
V +D L D + + + F KIHC N + FL DILV+ L
Sbjct: 678 VFLDHLKDTDTSGMDSTMKFPAERLFDKIHCVNPEIRREFYFLIHDILVVDSL 730
>AL032626-15|CAA21535.1| 156|Caenorhabditis elegans Hypothetical
protein Y37D8A.18 protein.
Length = 156
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 109 LVLAHSLRRAGLVYPAVALITPTVSEAMRDRLRAVFSE 222
L LA SLR GL+ ++ + PTV+ A + +++AV +
Sbjct: 2 LKLASSLR-TGLISRSIRTLAPTVNPAEQQQVQAVLPD 38
>AC006680-6|AAK72300.1| 335|Caenorhabditis elegans Serpentine
receptor, class j protein13 protein.
Length = 335
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 139 GLVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALL 276
G+V+ + + + MRD +R VF E V DS D A LA L
Sbjct: 146 GIVWGGICELFLYADDEMRDYIRDVFRETYEV---DSYDIAFLAAL 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,793,965
Number of Sequences: 27780
Number of extensions: 164635
Number of successful extensions: 536
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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