Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2099
         (468 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep: Trans...    53   3e-06
UniRef50_Q6AIW9 Cluster: Related to ferredoxin; n=1; Desulfotale...    33   3.1  
UniRef50_A1FMN4 Cluster: Cation diffusion facilitator family tra...    32   7.2  
UniRef50_Q9VVC1 Cluster: CG11905-PA, isoform A; n=1; Drosophila ...    31   9.5  
UniRef50_O97276 Cluster: Putative uncharacterized protein MAL3P5...    31   9.5  

>UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep:
           Transposase - Bombyx mori (Silk moth)
          Length = 346

 Score = 53.2 bits (122), Expect = 3e-06
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = -2

Query: 464 IRDADWFSSNPKTLTL*TFKLWVRFREYACSKRHGDIESPKKIFGPTSGEISMETMRKSI 285
           IR  DW SS+P    L  +K+W    E ACSK H ++ES K      + +I M+ +R +I
Sbjct: 269 IRHEDWPSSSPDLNPL-DYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAI 327

Query: 284 GSVVKQIKGLYKSKGGH 234
               +++K   ++ GGH
Sbjct: 328 DDWPRRLKACIQNHGGH 344


>UniRef50_Q6AIW9 Cluster: Related to ferredoxin; n=1; Desulfotalea
           psychrophila|Rep: Related to ferredoxin - Desulfotalea
           psychrophila
          Length = 422

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +1

Query: 256 RPLICLTTEPMDLRIVSMEISPLVGPNIFLGDSMSPCRLEQAYSLNLTH 402
           RP ICL  +  +L     E SPL G +IF  D ++P +  + +SL L H
Sbjct: 349 RPAICLCHDAKELEQAMQETSPLAG-SIFQLDVVAP-KKREIFSLRLAH 395


>UniRef50_A1FMN4 Cluster: Cation diffusion facilitator family
           transporter; n=2; Proteobacteria|Rep: Cation diffusion
           facilitator family transporter - Pseudomonas putida W619
          Length = 331

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 356 IESPKKIFGPTSGEISMETMRKSIGSVVKQIKGLYKSKGGH 234
           IES  ++F PT  +  M TM   +G +V  I  L  + GGH
Sbjct: 111 IESVLRLFQPTQVQFGMATMIAIVGLLVNIISALLLAGGGH 151


>UniRef50_Q9VVC1 Cluster: CG11905-PA, isoform A; n=1; Drosophila
           melanogaster|Rep: CG11905-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 607

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 398 VRFREYACSKRHGDIESPKKIFGPTSGEISMETMRKSIGSVVKQIK 261
           V F+EY    R   +  P+KI  PTS        RK +GS  K ++
Sbjct: 271 VNFKEYRLDSREKPVHKPQKI-QPTSSPELNSLNRKKVGSTAKPVR 315


>UniRef50_O97276 Cluster: Putative uncharacterized protein
           MAL3P5.16; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL3P5.16 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1281

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = -3

Query: 280 RWSNRLKAYINPKVAILNRTYFFFFVETLINMWV*ISIILHYFI*QKCIY 131
           R+  ++K  +N  + IL RTYFF F E  +N+++   + LHYF    C+Y
Sbjct: 750 RFFYKMKYLLNNLLIIL-RTYFFIFQE--LNIYIYNFVTLHYF----CVY 792


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,011,494
Number of Sequences: 1657284
Number of extensions: 8986684
Number of successful extensions: 19563
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19560
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)