Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2099
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   5.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   9.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   9.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   9.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = -3

Query: 235 ILNRTYFFFFVETLINMWV*ISIILHYFI*QKCIYICS 122
           IL   Y+F++   L  + + + + ++YF     ++ C+
Sbjct: 234 ILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCA 271


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 327 NQWRNFHGNNA*IH 286
           N+W N +GNN+  H
Sbjct: 374 NRWHNNNGNNSNNH 387


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 47  CNSSFNFFVYVIFGC 91
           C+++FN F+  +F C
Sbjct: 163 CDNNFNVFLRQVFTC 177


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  PQYLLPTVCNSSFNFFV 73
           P YLL  VCN+ +  F+
Sbjct: 286 PYYLLIEVCNAGYLPFI 302


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 112 VKFCYKCKCI 141
           V +C KC+C+
Sbjct: 59  VLYCMKCECV 68


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 212 KKICSIQNGH 241
           K++C + NGH
Sbjct: 203 KQVCKLNNGH 212


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 212 KKICSIQNGH 241
           K++C + NGH
Sbjct: 28  KQVCKLNNGH 37


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 172 KFIPTYLLKSQQKKKNMFYSKWPPL 246
           KF+PT L   +      +Y + PPL
Sbjct: 9   KFLPTVLPHQEVPPPFGYYHEEPPL 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,746
Number of Sequences: 336
Number of extensions: 2550
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)