Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2099
         (468 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058597-1|AAL13826.1|  607|Drosophila melanogaster LD29172p pro...    31   0.59 
AE014296-2838|AAN11720.1|  607|Drosophila melanogaster CG11905-P...    31   0.59 
AE014296-2837|AAN11719.1|  607|Drosophila melanogaster CG11905-P...    31   0.59 
AE014296-2836|AAF49392.3|  607|Drosophila melanogaster CG11905-P...    31   0.59 
AE014296-2355|AAF49762.2| 1155|Drosophila melanogaster CG32138-P...    28   5.5  
AE014296-2354|AAF49761.2| 1165|Drosophila melanogaster CG32138-P...    28   5.5  
AE014134-3339|AAF53961.2| 1291|Drosophila melanogaster CG9256-PB...    27   9.6  
AE014134-3338|AAF53960.2| 1291|Drosophila melanogaster CG9256-PA...    27   9.6  

>AY058597-1|AAL13826.1|  607|Drosophila melanogaster LD29172p
           protein.
          Length = 607

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 398 VRFREYACSKRHGDIESPKKIFGPTSGEISMETMRKSIGSVVKQIK 261
           V F+EY    R   +  P+KI  PTS        RK +GS  K ++
Sbjct: 271 VNFKEYRLDSREKPVHKPQKI-QPTSSPELNSLNRKKVGSTAKPVR 315


>AE014296-2838|AAN11720.1|  607|Drosophila melanogaster CG11905-PG,
           isoform G protein.
          Length = 607

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 398 VRFREYACSKRHGDIESPKKIFGPTSGEISMETMRKSIGSVVKQIK 261
           V F+EY    R   +  P+KI  PTS        RK +GS  K ++
Sbjct: 271 VNFKEYRLDSREKPVHKPQKI-QPTSSPELNSLNRKKVGSTAKPVR 315


>AE014296-2837|AAN11719.1|  607|Drosophila melanogaster CG11905-PD,
           isoform D protein.
          Length = 607

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 398 VRFREYACSKRHGDIESPKKIFGPTSGEISMETMRKSIGSVVKQIK 261
           V F+EY    R   +  P+KI  PTS        RK +GS  K ++
Sbjct: 271 VNFKEYRLDSREKPVHKPQKI-QPTSSPELNSLNRKKVGSTAKPVR 315


>AE014296-2836|AAF49392.3|  607|Drosophila melanogaster CG11905-PA,
           isoform A protein.
          Length = 607

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 398 VRFREYACSKRHGDIESPKKIFGPTSGEISMETMRKSIGSVVKQIK 261
           V F+EY    R   +  P+KI  PTS        RK +GS  K ++
Sbjct: 271 VNFKEYRLDSREKPVHKPQKI-QPTSSPELNSLNRKKVGSTAKPVR 315


>AE014296-2355|AAF49762.2| 1155|Drosophila melanogaster CG32138-PB,
           isoform B protein.
          Length = 1155

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 301 QCVNP*VRWSNRLKAYINPKVAILNRTYFFFFV 203
           Q  +P   + ++L+ Y++PK +  +R Y F+F+
Sbjct: 124 QAKDPPSHYLSKLRTYLDPKASRSHRLYLFYFL 156


>AE014296-2354|AAF49761.2| 1165|Drosophila melanogaster CG32138-PA,
           isoform A protein.
          Length = 1165

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 301 QCVNP*VRWSNRLKAYINPKVAILNRTYFFFFV 203
           Q  +P   + ++L+ Y++PK +  +R Y F+F+
Sbjct: 124 QAKDPPSHYLSKLRTYLDPKASRSHRLYLFYFL 156


>AE014134-3339|AAF53961.2| 1291|Drosophila melanogaster CG9256-PB,
            isoform B protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 359  DIESPKKIFGPTSGEISMETMR-KSIGSVVKQ 267
            DIESP++  GPT+ E+ +   R +S  S+V +
Sbjct: 914  DIESPEQAIGPTAAELILPWRRDRSYQSIVAE 945


>AE014134-3338|AAF53960.2| 1291|Drosophila melanogaster CG9256-PA,
            isoform A protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 359  DIESPKKIFGPTSGEISMETMR-KSIGSVVKQ 267
            DIESP++  GPT+ E+ +   R +S  S+V +
Sbjct: 914  DIESPEQAIGPTAAELILPWRRDRSYQSIVAE 945


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,555,562
Number of Sequences: 53049
Number of extensions: 401047
Number of successful extensions: 653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)