Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2096
         (389 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   5.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 105 RLKNYTFLIIIILFVRYFHSIY 170
           R K YT + I I+   Y HS Y
Sbjct: 24  RFKLYTIVHIFIIIALYAHSSY 45


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 116 LYIFNYYHFICSLFSFDILIYS*FACVVI 202
           L++   YHF C+   F + +   F C  I
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLL--FCCAFI 187


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 303 FGFYLNIAKGRSIAAIMNCL 362
           FG  L +  G+SI  ++ CL
Sbjct: 239 FGTCLILITGKSIVQLLTCL 258


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 116 LYIFNYYHFICSLF 157
           LY FNYY  + + F
Sbjct: 75  LYCFNYYVIVVTTF 88


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 128 NYYHFICSLFSFDIL 172
           NY  F CSLF   IL
Sbjct: 48  NYVTFFCSLFIVVIL 62


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 303 FGFYLNIAKGRSIAAIMNCL 362
           FG  L +  G+SI  ++ CL
Sbjct: 239 FGTCLILITGKSIVQLLTCL 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,763
Number of Sequences: 336
Number of extensions: 999
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)