Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2095
         (422 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0065 + 20450814-20452748                                         30   0.67 
05_03_0269 + 11333823-11334639,11334714-11334775                       29   1.5  
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733...    29   1.5  
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533...    28   3.6  
09_01_0028 + 486800-486890,486928-488009,488825-489190,489342-48...    27   6.2  
06_01_0997 - 7752634-7753128,7753280-7753708,7754403-7755196,775...    27   6.2  
10_01_0206 - 2206359-2209142                                           27   8.2  

>03_05_0065 + 20450814-20452748
          Length = 644

 Score = 30.3 bits (65), Expect = 0.67
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -1

Query: 119 MRSSFLKPATLPGSKKKVPKSSTLLMTALYTNLSVAG 9
           M +S L P T+PGSK + P ++T + TA   + +VAG
Sbjct: 1   MLTSSLPPPTVPGSKPR-PAAATSVSTAATADAAVAG 36


>05_03_0269 + 11333823-11334639,11334714-11334775
          Length = 292

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 146 ETILKALDCMRSSFLKPATLPGSKKKVPKSS 54
           +   +AL+       KPA  P  KKK+PKSS
Sbjct: 192 DAAFRALEAEAREAKKPAAAPPPKKKIPKSS 222


>04_03_0927 +
           20871487-20871903,20872667-20872812,20873204-20873301,
           20873378-20873572,20873670-20873797,20873892-20874050,
           20875119-20875223,20875449-20875559,20875653-20875790,
           20875909-20876091,20876362-20876517,20876615-20876738,
           20876820-20877030,20877614-20877729,20877828-20878053,
           20878218-20878311,20879198-20879275,20879822-20879971,
           20880086-20880292,20880584-20880788,20880990-20881096
          Length = 1117

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 109 LDLIQSRALRIVSGAMKSSPVNALQIECCDPPLNLRRQYLSDRF 240
           L +I +++LR+++ A  SSPV+  + +  DP +  +  Y S  F
Sbjct: 187 LGVIDNKSLRLITDASVSSPVSREKAQGLDPSMREKVIYSSPNF 230


>03_06_0531 +
           34552206-34552598,34552665-34552735,34553363-34553369,
           34553603-34553736,34553834-34554245,34554655-34554753,
           34555059-34555283,34555652-34556029,34556412-34556555,
           34556832-34556927,34557228-34557547,34557965-34558040
          Length = 784

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 146 ETILKALDCMRSSFLKPATLPGSKKKVPK 60
           ETIL+ L   R S L  AT+PG  KK+ +
Sbjct: 300 ETILQQLPAERQSMLFSATMPGWVKKLSR 328


>09_01_0028 +
           486800-486890,486928-488009,488825-489190,489342-489692
          Length = 629

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 241 IFRIVQFHNHPLISKLEFLSKKVPSSHKPLP 333
           + + V+ H HPL+ K  F  KK   SH+ +P
Sbjct: 227 VIQFVEEHTHPLVRK--FSLKKFLRSHRAIP 255


>06_01_0997 -
           7752634-7753128,7753280-7753708,7754403-7755196,
           7755247-7755574
          Length = 681

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 241 IFRIVQFHNHPLISKLEFLSKKVPSSHKPLP 333
           + + V+ H HPL+ K  F  KK   SH+ +P
Sbjct: 210 VIQFVEEHTHPLVRK--FSLKKFLRSHRAIP 238


>10_01_0206 - 2206359-2209142
          Length = 927

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 127 RALRIVSGAMKSSPVNALQIECCDPPLNLRRQYLSDRFIFR 249
           R L +V   +K  P+  +   C    LNL R Y+ +  IFR
Sbjct: 788 RGLFLVWSQLKQDPLPPISRLCNLTQLNLTRAYVGELLIFR 828


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,219,425
Number of Sequences: 37544
Number of extensions: 181816
Number of successful extensions: 294
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)