Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2095
         (422 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094959-1|BAC04461.1|  148|Homo sapiens protein ( Homo sapiens ...    30   2.8  

>AK094959-1|BAC04461.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37640 fis, clone BRHIP1000174. ).
          Length = 148

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +1

Query: 154 MKSSPVNALQIECCDPPLNLRRQYLSDRFIFRIVQFHNHPLISKLEFLSKKVPSSHKPLP 333
           + SSPV   +++CC  PL      +S   +   VQ  +HPL S +  +S   P  H+   
Sbjct: 71  VSSSPV-IHEVQCCHHPLGSTMTLVSSSPVIHEVQCCHHPLGSTITLVSSS-PRIHEVQC 128

Query: 334 C 336
           C
Sbjct: 129 C 129



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +1

Query: 133 LRIVSGAMKSSPVNALQIECCDPPLNLRRQYLSDRFIFRIVQFHNHPLISKLEFLSKKVP 312
           L + +  M  SP    + +CC  PL      +S   +   VQ  +HPL S +  +S   P
Sbjct: 40  LPVSTSTMVLSPARIHESQCCHHPLGSTITLVSSSPVIHEVQCCHHPLGSTMTLVSSS-P 98

Query: 313 SSHKPLPC 336
             H+   C
Sbjct: 99  VIHEVQCC 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,877,706
Number of Sequences: 237096
Number of extensions: 1062274
Number of successful extensions: 2724
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)